RNA–Protein interactions for RNA: ENST00000538271.1

PRKAB1-204, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 4

Gene PRKAB1, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-204ENST00000538271 YPEL2Q96QA6 119 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 OR2A7Q96R45 310 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 YIPF3Q9GZM5 350 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 SLC35D1Q9NTN3 355 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 JPT1Q9UK76 154 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 TRAPPC2LQ9UL33 140 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 V9GYQ6 96 aa6.42□□□□□ -1.38
PRKAB1-204ENST00000538271 ARPC2O15144 300 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 MAGEB4O15481 346 aaPredicted RBP6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 ZNF207O43670 478 aaKnown RBP6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 GADD45GO95257 159 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 IL6RP08887 468 aaPredicted RBP6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 GNRHRP30968 328 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 DAD1P61803 113 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 TNXAQ16473 311 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 ZSCAN26Q16670 478 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 LY6G6FQ5SQ64 297 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 DMKNQ6E0U4 476 aaPredicted RBP6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 Q6ZNX1 250 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 DRAXINQ8NBI3 349 aaPredicted RBP6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 CCDC54Q8NEL0 328 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 OR4K15Q8NH41 348 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 ASB17Q8WXJ9 295 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 RFKQ969G6 155 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 UHRF2Q96PU4 802 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 APOL4Q9BPW4 351 aa6.41□□□□□ -1.38
PRKAB1-204ENST00000538271 OR7C1O76099 320 aaPredicted RBP6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 OCM2P0CE71 109 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 OCMP0CE72 109 aaPredicted RBP6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 RCC1P18754 421 aaPredicted RBP6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 GPR183P32249 361 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 FAM98BQ52LJ0 330 aaKnown RBP6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 PLET1Q6UQ28 207 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 ZNF705AQ6ZN79 300 aaPredicted RBP6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 RASSF6Q6ZTQ3 369 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 SCXQ7RTU7 201 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 PDPNQ86YL7 162 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 FAM24BQ8N5W8 94 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 NEK7Q8TDX7 302 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 C7orf34Q96L11 122 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 TM2D1Q9BX74 207 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 TAF9BQ9HBM6 251 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 ARMC1Q9NVT9 282 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 SMPXQ9UHP9 88 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 ZNF257Q9Y2Q1 563 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 RFNGQ9Y644 331 aa6.4□□□□□ -1.38
PRKAB1-204ENST00000538271 IGHV3OR16-8A0A075B7F1 116 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 TRBV7-1A0A0A6YYK4 115 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 SMIM9A6NGZ8 99 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 FXYD1O00168 92 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 CHEK1O14757 476 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 NXPH3O95157 252 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 ALDH3B2P48448 385 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 SMIM11AP58511 58 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 PAFAH1B2P68402 229 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 LIPEQ05469 1076 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 IGFL4Q6B9Z1 124 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 TRAT1Q6PIZ9 186 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 NFE4Q86UQ8 179 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 SLC25A42Q86VD7 318 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 STX19Q8N4C7 294 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 ZNF383Q8NA42 475 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 PAIP2Q9BPZ3 127 aaKnown RBP6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 EBF4Q9BQW3 602 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 C20orf24Q9BUV8 137 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 RHPN1-AS1Q9BWJ2 59 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 XCL2Q9UBD3 114 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 STEAP1Q9UHE8 339 aa6.39□□□□□ -1.39
PRKAB1-204ENST00000538271 ZNF705FA8MVS1 300 aaPredicted RBP6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 F5H768 121 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 K7EMT4 169 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 MT-ND2P03891 347 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 MAS1P04201 325 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 ZNF705DP0CH99 300 aaPredicted RBP6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 ZNF705BP0CI00 300 aaPredicted RBP6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 CASQ1P31415 396 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 GK3PQ14409 553 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 PRSS8Q16651 343 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 IFT20Q8IY31 132 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 OR10K1Q8NGX5 313 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 OR10AC1Q8NH08 325 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 ABHD14BQ96IU4 210 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 CMTM3Q96MX0 182 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 C1QTNF4Q9BXJ3 329 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 ST3GAL6Q9Y274 331 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 TMEM14AQ9Y6G1 99 aa6.38□□□□□ -1.39
PRKAB1-204ENST00000538271 LOC107986453A0A1B0GWG9 222 aa6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 SRRM4A7MD48 611 aaKnown RBP6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 APOA2P02652 100 aa6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 MRPL3P09001 348 aaKnown RBP6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 GNB3P16520 340 aa6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 SOX2P48431 317 aa6.37□□□□□ -1.39
PRKAB1-204ENST00000538271 IRF3Q14653 427 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms