RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 TMEM65Q6PI78 240 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 C8orf86Q6ZUL3 223 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 ZNF695Q8IW36 515 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 VKORC1L1Q8N0U8 176 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 LFNGQ8NES3 379 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 OR51H1Q8NH63 302 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 BORCS5Q969J3 196 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 FXYD6Q9H0Q3 95 aa18.02■□□□□ 0.48
CLTA-209ENST00000538225 RAMP3O60896 148 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 IGLV1-40P01703 118 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 KIR2DS2P43631 304 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 CATR1Q13166 79 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 PRSS8Q16651 343 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 MRGPRG-AS1Q2M3A8 158 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 ACTBL2Q562R1 376 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 AADACL3Q5VUY0 350 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 PYHIN1Q6K0P9 492 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 SPAG16Q8N0X2 631 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 CASTOR1Q8WTX7 329 aa18.01■□□□□ 0.47
CLTA-209ENST00000538225 TINAGL1Q9GZM7 467 aaPredicted RBP18.01■□□□□ 0.47
CLTA-209ENST00000538225 NXF2Q9GZY0 626 aaKnown RBP18.01■□□□□ 0.47
CLTA-209ENST00000538225 FOXA2Q9Y261 457 aaPredicted RBP18.01■□□□□ 0.47
CLTA-209ENST00000538225 GABARAPH6UMI1 98 aa18■□□□□ 0.47
CLTA-209ENST00000538225 SOX15O60248 233 aa18■□□□□ 0.47
CLTA-209ENST00000538225 CD3DP04234 171 aa18■□□□□ 0.47
CLTA-209ENST00000538225 IFNA6P05013 189 aa18■□□□□ 0.47
CLTA-209ENST00000538225 TNFSF8P32971 234 aa18■□□□□ 0.47
CLTA-209ENST00000538225 AKIRIN2Q53H80 203 aa18■□□□□ 0.47
CLTA-209ENST00000538225 RNASE10Q5GAN6 216 aaKnown RBP18■□□□□ 0.47
CLTA-209ENST00000538225 VAX1Q5SQQ9 334 aa18■□□□□ 0.47
CLTA-209ENST00000538225 PGLYRP1O75594 196 aaPredicted RBP17.99■□□□□ 0.47
CLTA-209ENST00000538225 CDX1P47902 265 aaPredicted RBP17.99■□□□□ 0.47
CLTA-209ENST00000538225 RAB9AP51151 201 aa17.99■□□□□ 0.47
CLTA-209ENST00000538225 MRPS10P82664 201 aaKnown RBP17.99■□□□□ 0.47
CLTA-209ENST00000538225 TNXAQ16473 311 aa17.99■□□□□ 0.47
CLTA-209ENST00000538225 TCTEX1D1Q8N7M0 179 aa17.99■□□□□ 0.47
CLTA-209ENST00000538225 DUX3Q96PT4 197 aa17.99■□□□□ 0.47
CLTA-209ENST00000538225 ZNF430Q9H8G1 570 aaPredicted RBP17.99■□□□□ 0.47
CLTA-209ENST00000538225 GPR31O00270 319 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 RLN1P04808 185 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 SSX9Q7RTT3 188 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 C1QL4Q86Z23 238 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 CMTM1Q8IZ96 169 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 TMEM229BQ8NBD8 167 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 RABL2AQ9UBK7 228 aaPredicted RBP17.98■□□□□ 0.47
CLTA-209ENST00000538225 RABL2BQ9UNT1 228 aa17.98■□□□□ 0.47
CLTA-209ENST00000538225 MSGN1A6NI15 193 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 ZNF701M0R085 212 aaPredicted RBP17.97■□□□□ 0.47
CLTA-209ENST00000538225 OR2A4O95047 310 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 HRASP01112 189 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 CD33P20138 364 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 SLC6A1P30531 599 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 TAS2R19P59542 299 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 KIAA0141Q14154 515 aaPredicted RBP17.97■□□□□ 0.47
CLTA-209ENST00000538225 DEFB136Q30KP8 78 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 PHLDA2Q53GA4 152 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 LPCAT3Q6P1A2 487 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 ETV3LQ6ZN32 361 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 POC5Q8NA72 575 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 OR5T1Q8NG75 326 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 OR4D10Q8NGI6 311 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 SMIM4Q8WVI0 70 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 RHOVQ96L33 236 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 MS4A10Q96PG2 267 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 OR2A7Q96R45 310 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 PHB2Q99623 299 aa17.97■□□□□ 0.47
CLTA-209ENST00000538225 FABP12A6NFH5 140 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 CTDSPLO15194 276 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 RBFOX2O43251 390 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLTA-209ENST00000538225 CREBL2O60519 120 aaPredicted RBP17.96■□□□□ 0.47
CLTA-209ENST00000538225 ACTL6BO94805 426 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 APELAP0DMC3 54 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 TBPP20226 339 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 MMD2Q8IY49 270 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 ZNF491Q8N8L2 437 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 OR5M8Q8NGP6 311 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 VSTM2AQ8TAG5 236 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 MYOZ3Q8TDC0 251 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 OR5B12Q96R08 314 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 RSRP1Q9BUV0 290 aa17.96■□□□□ 0.47
CLTA-209ENST00000538225 G3V4G9 280 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 RAB3DO95716 219 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 HPRT1P00492 218 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 CD74P04233 296 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 CD40LGP29965 261 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 SSBP1Q04837 148 aaKnown RBP17.95■□□□□ 0.46
CLTA-209ENST00000538225 STEAP1BQ6NZ63 245 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 MRPL41Q8IXM3 137 aaKnown RBP17.95■□□□□ 0.46
CLTA-209ENST00000538225 PUSL1Q8N0Z8 303 aaKnown RBP17.95■□□□□ 0.46
CLTA-209ENST00000538225 ARRDC1Q8N5I2 433 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 WFDC9Q8NEX5 89 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 CD300LFQ8TDQ1 290 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 C4orf3Q8WVX3 66 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 SRSF12Q8WXF0 261 aaKnown RBP17.95■□□□□ 0.46
CLTA-209ENST00000538225 RAX2Q96IS3 184 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 UBE2E2Q96LR5 201 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 GNB4Q9HAV0 340 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 ZNF355PQ9NSJ1 428 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 VSIG4Q9Y279 399 aa17.95■□□□□ 0.46
CLTA-209ENST00000538225 CMYA5Q8N3K9 4069 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms