RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 LSM6P62312 80 aaKnown RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 OR4X2Q8NGF9 303 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 IL36BQ9NZH7 164 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TRAV14DV4A0A0A6YYC5 116 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM262E9PQX1 116 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 ACSF3Q4G176 576 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 C19orf54Q5BKX5 351 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 OR6X1Q8NH79 312 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 NEUROG1Q92886 237 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GP6Q9HCN6 339 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 IGHV3-21A0A0B4J1V1 117 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TRAV12-3A0A0B4J271 114 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 A0A1W2PPC1 479 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 NPSP0C0P6 89 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GCHFRP30047 84 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 C2orf83Q53S99 150 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 OCIAD2Q56VL3 154 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 LOXL4Q96JB6 756 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TUBA4BQ9H853 241 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 DRD1P21728 446 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 NOVP48745 357 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 FOXA3P55318 350 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 DPTQ07507 201 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 GPHA2Q96T91 129 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 MSGN1A6NI15 193 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 EGR1P18146 543 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 C1orf194Q5T5A4 169 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 AGBL5Q8NDL9 886 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 ST20Q9HBF5 79 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TRAV8-4A0A0B4J246 113 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 VENTXO95231 258 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 FCGR2BP31994 310 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TNFRSF4P43489 277 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 HIST1H1AQ02539 215 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF788Q6ZQV5 615 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM186Q96B77 213 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 SMIM8Q96KF7 97 aa4.91□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM50AO95807 157 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 DCAF10Q5QP82 559 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 TEPPQ6URK8 271 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 C11orf68Q9H3H3 251 aaKnown RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 MRPS18AQ9NVS2 196 aaKnown RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 MNX1P50219 401 aaPredicted RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 DEFB115Q30KQ5 88 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 C1orf122Q6ZSJ8 110 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 FGF22Q9HCT0 170 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 PXNP49023 591 aaPredicted RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 MRPS11P82912 194 aaKnown RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 RSPO3Q9BXY4 272 aaPredicted RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 C3orf80F5H4A9 247 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 HOXB3P14651 431 aaPredicted RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 TMEM249Q2WGJ8 235 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 ZNF585BQ52M93 769 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 SFTPA2Q8IWL1 248 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 SFTPA1Q8IWL2 248 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 SRSF12Q8WXF0 261 aaKnown RBP4.9□□□□□ -1.62
CSMD1-215ENST00000537824 WDYHV1Q96HA8 205 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 ADAMTS20P59510 1910 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 CTSVO60911 334 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 ZPLD1Q8TCW7 415 aa4.9□□□□□ -1.62
CSMD1-215ENST00000537824 SH2D7A6NKC9 451 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-215ENST00000537824 GRAMD2BQ96HH9 432 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 LINC00470Q9BZP3 86 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.9□□□□□ -1.63
CSMD1-215ENST00000537824 CEACAM1P13688 526 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 ZNF32P17041 273 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TDGF1P3P51864 188 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 CLDND2Q8NHS1 167 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 PIMREGQ9BSJ6 248 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 OR2H1Q9GZK4 316 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 PLSCR2Q9NRY7 297 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TRBV5-7A0A0A0MS05 114 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 YPEL5P62699 121 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TIMM23BQ5SRD1 257 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 SPRED2Q7Z698 418 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 OR52E5Q8NH55 327 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 LRRC29Q8WV35 223 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 RAB9AP51151 201 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 DLX6P56179 175 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 HBBP68871 147 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 CIRBPQ14011 172 aaKnown RBP4.9□□□□□ -1.63
CSMD1-215ENST00000537824 WFDC8Q8IUA0 241 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 STPG3Q8N7X2 389 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 RNF122Q9H9V4 155 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 FASNP49327 2511 aaKnown RBP4.9□□□□□ -1.63
CSMD1-215ENST00000537824 GPR6P46095 362 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-215ENST00000537824 LCN2P80188 198 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TMEM155Q4W5P6 130 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 FAM71F2Q6NXP2 309 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 C1QL4Q86Z23 238 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 TIMD4Q96H15 378 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 IGLV3-25P01717 112 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 POU2F2P09086 479 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 LCN12Q6JVE5 192 aa4.9□□□□□ -1.63
CSMD1-215ENST00000537824 ODAMA1E959 279 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 MYF5P13349 255 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 PYY3Q5JQD4 70 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 DCAF12Q5T6F0 453 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 TCF24Q7RTU0 167 aa4.89□□□□□ -1.63
CSMD1-215ENST00000537824 MOGAT3Q86VF5 341 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms