RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 SLC25A42Q86VD7 318 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 MMD2Q8IY49 270 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 ADAD2Q8NCV1 583 aaKnown RBP10.05□□□□□ -0.8
RTN3-207ENST00000536011 VSTM2AQ8TAG5 236 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 SRSF12Q8WXF0 261 aaKnown RBP10.05□□□□□ -0.8
RTN3-207ENST00000536011 SNAPC3Q92966 411 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 C5orf30Q96GV9 206 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 DCUN1D5Q9BTE7 237 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 PEMTQ9UBM1 199 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 OR2W1Q9Y3N9 320 aa10.05□□□□□ -0.8
RTN3-207ENST00000536011 SRRM4A7MD48 611 aaKnown RBP10.04□□□□□ -0.8
RTN3-207ENST00000536011 A8MZ25 164 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 AIREO43918 545 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 IGHV4-30-4P0DP06 118 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
RTN3-207ENST00000536011 DYRK1AQ13627 763 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 CNIH2Q6PI25 160 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 IDO2Q6ZQW0 420 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 OR4S2Q8NH73 311 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 PALMDQ9NP74 551 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 TXNL4BQ9NX01 149 aaKnown RBP10.04□□□□□ -0.8
RTN3-207ENST00000536011 SIGLEC8Q9NYZ4 499 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 DAPK2Q9UIK4 370 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 SSR3Q9UNL2 185 aa10.04□□□□□ -0.8
RTN3-207ENST00000536011 LINC00473A8K010 186 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 FCGR3BO75015 233 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 SAA1P0DJI8 122 aaPredicted RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 APELAP0DMC3 54 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 SCAND1P57086 179 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 RHOGP84095 191 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 ATP5G2Q06055 141 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 EXOSC2Q13868 293 aaKnown RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 HAPLN4Q86UW8 402 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 NR2C2APQ86WQ0 139 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 Q8N402 240 aa10.03□□□□□ -0.8
RTN3-207ENST00000536011 HSD17B10Q99714 261 aaKnown RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 YTHDF1Q9BYJ9 559 aaKnown RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 ZNF430Q9H8G1 570 aaPredicted RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 RBMX2Q9Y388 322 aaKnown RBP10.03□□□□□ -0.8
RTN3-207ENST00000536011 IGKV1D-8A0A087WSZ0 117 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 SMIM30A4D0T7 59 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 TMEM235A6NFC5 223 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 LYL1P12980 280 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 NFYAP23511 347 aaPredicted RBP10.02□□□□□ -0.81
RTN3-207ENST00000536011 SFXN4Q6P4A7 337 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 SPARTQ8N0X7 666 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 NECAP1Q8NC96 275 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 OR2K2Q8NGT1 345 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 NUDCD2Q8WVJ2 157 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 TCTEX1D2Q8WW35 142 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 TM2D3Q9BRN9 247 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 AIFM2Q9BRQ8 373 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 RHBDL2Q9NX52 303 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
RTN3-207ENST00000536011 ETV7Q9Y603 341 aa10.02□□□□□ -0.81
RTN3-207ENST00000536011 DPPA5A6NC42 116 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 J3QRK9 145 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 DHFRP00374 187 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 MAS1LP35410 378 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 KIR2DS2P43631 304 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 ARPC4P59998 168 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 DEFA5Q01523 94 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 MRGPRG-AS1Q2M3A8 158 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 CASC10Q5T4H9 136 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 LCE2AQ5TA79 106 aaPredicted RBP10.01□□□□□ -0.81
RTN3-207ENST00000536011 ZNF66Q6ZN08 573 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 Q8N1Y9 231 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 TTC9CQ8N5M4 171 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 LGALS14Q8TCE9 139 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 ISOC1Q96CN7 298 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 SPATA25Q9BR10 227 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 OR51E2Q9H255 320 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 TUBA4BQ9H853 241 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 AKIP1Q9NQ31 210 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 C19orf73Q9NVV2 129 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 ELF5Q9UKW6 265 aaPredicted RBP10.01□□□□□ -0.81
RTN3-207ENST00000536011 ZNF257Q9Y2Q1 563 aa10.01□□□□□ -0.81
RTN3-207ENST00000536011 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
RTN3-207ENST00000536011 A0A0A6YYH2 397 aa10□□□□□ -0.81
RTN3-207ENST00000536011 TRBV9A0A0B4J1U6 114 aa10□□□□□ -0.81
RTN3-207ENST00000536011 A6NJ64 397 aa10□□□□□ -0.81
RTN3-207ENST00000536011 KBTBD11O94819 623 aa10□□□□□ -0.81
RTN3-207ENST00000536011 HRASP01112 189 aa10□□□□□ -0.81
RTN3-207ENST00000536011 TRBV12-3P01733 135 aa10□□□□□ -0.81
RTN3-207ENST00000536011 CSN3P07498 182 aa10□□□□□ -0.81
RTN3-207ENST00000536011 MSMO1Q15800 293 aa10□□□□□ -0.81
RTN3-207ENST00000536011 OR2B11Q5JQS5 317 aa10□□□□□ -0.81
RTN3-207ENST00000536011 IL34Q6ZMJ4 242 aa10□□□□□ -0.81
RTN3-207ENST00000536011 LAX1Q8IWV1 398 aa10□□□□□ -0.81
RTN3-207ENST00000536011 OR2A7Q96R45 310 aa10□□□□□ -0.81
RTN3-207ENST00000536011 TNCP24821 2201 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 TMEM127O75204 238 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 IFNA6P05013 189 aa9.99□□□□□ -0.81
RTN3-207ENST00000536011 RPL27AP46776 148 aaKnown RBP9.99□□□□□ -0.81
RTN3-207ENST00000536011 C15orf32Q32M92 178 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms