RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 CNIH1O95406 144 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 TRGV3P03979 118 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 ZP3P21754 424 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 SDC2P34741 201 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 SLURP1P55000 103 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 TPPP2P59282 170 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 MSMO1Q15800 293 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 OVCH2Q7RTZ1 564 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 USMG5Q96IX5 58 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 WWC2-AS2Q96NR7 200 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 TINAGL1Q9GZM7 467 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-202ENST00000535685 OR51E2Q9H255 320 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 RANGRFQ9HD47 186 aaPredicted RBP8.3□□□□□ -1.08
CCDC60-202ENST00000535685 RHBDL2Q9NX52 303 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 DAPK2Q9UIK4 370 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 RRP15Q9Y3B9 282 aaKnown RBP8.3□□□□□ -1.08
CCDC60-202ENST00000535685 RBM7Q9Y580 266 aaKnown RBP8.3□□□□□ -1.08
CCDC60-202ENST00000535685 ETV7Q9Y603 341 aa8.3□□□□□ -1.08
CCDC60-202ENST00000535685 TMEM235A6NFC5 223 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 SSX5O60225 188 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 IGLV2-14P01704 120 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 AADACP22760 399 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 EIF4EBP1Q13541 118 aaPredicted RBP8.29□□□□□ -1.08
CCDC60-202ENST00000535685 PRSS8Q16651 343 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 OR6Q1Q8NGQ2 317 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 GRPEL2Q8TAA5 225 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 CASTOR1Q8WTX7 329 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 MS4A10Q96PG2 267 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 ST6GALNAC5Q9BVH7 336 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 CDIP1Q9H305 208 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 ANXA10Q9UJ72 324 aa8.29□□□□□ -1.08
CCDC60-202ENST00000535685 RBMX2Q9Y388 322 aaKnown RBP8.29□□□□□ -1.08
CCDC60-202ENST00000535685 C13orf42A0A1B0GVH6 325 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SMIM30A4D0T7 59 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 CREBL2O60519 120 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SAP30O75446 220 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 CRYZL1O95825 349 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 IGHV3-11P01762 117 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 CD36P16671 472 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 GNG2P59768 71 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 KLF5Q13887 457 aaPredicted RBP8.28□□□□□ -1.08
CCDC60-202ENST00000535685 CDK10Q15131 360 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 ZNF343Q6P1L6 599 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 ADAD2Q8NCV1 583 aaKnown RBP8.28□□□□□ -1.08
CCDC60-202ENST00000535685 OR5T1Q8NG75 326 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 NUDCD2Q8WVJ2 157 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SLC25A38Q96DW6 304 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 HSD17B10Q99714 261 aaKnown RBP8.28□□□□□ -1.08
CCDC60-202ENST00000535685 ELOVL1Q9BW60 279 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SIGLEC8Q9NYZ4 499 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SPATA2Q9UM82 520 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 PRELID3BQ9Y3B1 194 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 SMAD5-AS1Q9Y6J3 95 aa8.28□□□□□ -1.08
CCDC60-202ENST00000535685 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 IGKV1D-13A0A0B4J2D9 117 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 CLEC2LP0C7M8 214 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 OR9G9P0C7N8 305 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 IGKV1-13P0DP09 117 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 NFYAP23511 347 aaPredicted RBP8.27□□□□□ -1.09
CCDC60-202ENST00000535685 MECP2P51608 486 aaKnown RBP8.27□□□□□ -1.09
CCDC60-202ENST00000535685 DYRK1AQ13627 763 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 KLK9Q2XQG4 91 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 TIMM50Q3ZCQ8 353 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 ZNF66Q6ZN08 573 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 HOGA1Q86XE5 327 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 CROCCP3Q8IVE0 287 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 MMD2Q8IY49 270 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 ZBTB34Q8NCN2 500 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 OR5H6Q8NGV6 325 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
CCDC60-202ENST00000535685 OR4C12Q96R67 309 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 KLK9Q9UKQ9 250 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 MRPS7Q9Y2R9 242 aaKnown RBP8.27□□□□□ -1.09
CCDC60-202ENST00000535685 U3KQK5 164 aa8.27□□□□□ -1.09
CCDC60-202ENST00000535685 KMT2CQ8NEZ4 4911 aaKnown RBP8.26□□□□□ -1.09
CCDC60-202ENST00000535685 MSGN1A6NI15 193 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 A8MZ25 164 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 FCGR3BO75015 233 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 SAA1P0DJI8 122 aaPredicted RBP8.26□□□□□ -1.09
CCDC60-202ENST00000535685 GP9P14770 177 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 SPNP16150 400 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 MAS1LP35410 378 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 CBX5P45973 191 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 RPL30P62888 115 aaKnown RBP8.26□□□□□ -1.09
CCDC60-202ENST00000535685 FAM209BQ5JX69 171 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 KCTD9Q7L273 389 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 PUSL1Q8N0Z8 303 aaKnown RBP8.26□□□□□ -1.09
CCDC60-202ENST00000535685 Q8N1Y9 231 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 TTC9CQ8N5M4 171 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 BEST4Q8NFU0 473 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 OR4S2Q8NH73 311 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 VSTM2AQ8TAG5 236 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 SPIN2AQ99865 258 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 SPIN2BQ9BPZ2 258 aa8.26□□□□□ -1.09
CCDC60-202ENST00000535685 RNF167Q9H6Y7 350 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms