RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	TNFRSF9	Q07011	255 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PRSS22	Q9GZN4	317 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TRPM7	Q96QT4	1865 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PPP1R27	Q86WC6	154 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	SELENOH	Q8IZQ5	122 aa	Known RBP	13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PARD6A	Q9NPB6	346 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	DEPP	Q9NTK1	212 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	LINC00312	Q9Y6C7	94 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	LOC285556	D6RIA3	1793 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	RNF224	P0DH78	156 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	DRAM1	Q8N682	238 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CLRN3	Q8NCR9	226 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IL36RN	Q9UBH0	155 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	NEUROG3	Q9Y4Z2	214 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PHLDA3	Q9Y5J5	127 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PLAUR	Q03405	335 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	VAMP3	Q15836	100 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	LYRM7	Q5U5X0	104 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	REPIN1	Q9BWE0	567 aa	Known RBP	13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	PHOX2A	O14813	284 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GCSH	P23434	173 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	DPH3	Q96FX2	82 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FBXL15	Q9H469	300 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TUBD1	Q9UJT1	453 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	NCOR1	O75376	2440 aa		13.35	□□□□□ -0.27
NCAPD3-213	ENST00000534532	TMEM14DP	A8MWL7	114 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GNLY	P22749	145 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GALNT14	Q96FL9	552 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	GSX1	Q9H4S2	264 aa	Predicted RBP	13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MIC13	Q5XKP0	118 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MOS	P00540	346 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C8orf88	P0DMB2	117 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ZNF345	Q14585	488 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	IGLV3-32	A0A0A0MS00	114 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532		A0A0B4J293	547 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	UCP3	P55916	312 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	RPS20	P60866	119 aa	Known RBP	13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MIEN1	Q9BRT3	115 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C19orf24	Q9BVV8	132 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	MAP1LC3C	Q9BXW4	147 aa		13.34	□□□□□ -0.27
NCAPD3-213	ENST00000534532	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.33	□□□□□ -0.27
NCAPD3-213	ENST00000534532	CSRP3	P50461	194 aa		13.33	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C20orf204	Q6ZNR8	217 aa		13.33	□□□□□ -0.27
NCAPD3-213	ENST00000534532	C12orf77	C9JDV5	145 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IL4	P05112	153 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	HKR1	P10072	659 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	RTN4R	Q9BZR6	473 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	LYRM2	Q9NU23	88 aa	Predicted RBP	13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PEMT	Q9UBM1	199 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	FBXL7	Q9UJT9	491 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGHV3-35	A0A0C4DH35	117 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PIN1P1	O15428	100 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CELA3B	P08861	270 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CX3CL1	P78423	397 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ELOB	Q15370	118 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ZNF79	Q15937	498 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	NPIPB3	Q92617	1050 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SPRR3	Q9UBC9	169 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	DLX6	P56179	175 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	RUNX1	Q01196	453 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	RPL39P5	Q59GN2	51 aa		13.33	□□□□□ -0.28
NCAPD3-213	ENST00000534532	TAF15	Q92804	592 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	8e-7	■■■■□ 25
NCAPD3-213	ENST00000534532	VKORC1L1	Q8N0U8	176 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ST6GAL2	Q96JF0	529 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	DCAF16	Q9NXF7	216 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CACNA1B	Q00975	2339 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	APCS	P02743	223 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	VDAC2	P45880	294 aa	Predicted RBP	13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	DLK1	P80370	383 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	LRP11	Q86VZ4	500 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PPP1R3E	Q9H7J1	279 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	P2RY4	P51582	365 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	WDFY1	Q8IWB7	410 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ARPC1A	Q92747	370 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	AICDA	Q9GZX7	198 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ZNF818P	Q6ZRF7	136 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	FLVCR1-AS1	Q8TAF5	88 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	RSG1	Q9BU20	258 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR51M1	Q9H341	326 aa		13.32	□□□□□ -0.28
NCAPD3-213	ENST00000534532		A0A1W2PRX2	142 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	BCL2	P10415	239 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	HIST1H1A	Q02539	215 aa	Predicted RBP	13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	AWAT1	Q58HT5	328 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ZNF841	Q6ZN19	808 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	COLCA1	Q6ZS62	124 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	OR11H7	Q8NGC8	314 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PMS2P11	Q13670	270 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CD200R1L	Q6Q8B3	271 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	HSPB8	Q9UJY1	196 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IER3	P46695	156 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SLC25A38	Q96DW6	304 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	CKAP5	Q14008	2032 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	SNURFL	B1AK76	121 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ASPHD2	Q6ICH7	369 aa		13.31	□□□□□ -0.28
NCAPD3-213	ENST00000534532	IGKV1D-43	A0A0B4J1Z2	117 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	ANOS1	P23352	680 aa		13.3	□□□□□ -0.28
NCAPD3-213	ENST00000534532	MFAP2	P55001	183 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms