RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ATXN7L3Q14CW9 347 aaPredicted RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 UBE2V2Q15819 145 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MICAQ29983 383 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ODF4Q2M2E3 257 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 DEFB135Q30KP9 77 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 DEFB114Q30KQ6 69 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CCDC58Q4VC31 144 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TEX30Q5JUR7 227 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 KRBOX4Q5JUW0 171 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CLVS2Q5SYC1 327 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF684Q5T5D7 378 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SYT6Q5T7P8 510 aaPredicted RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 NXNL2Q5VZ03 156 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM42Q69YG0 159 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 KDM4DQ6B0I6 523 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 Q6P435 159 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CNIH2Q6PI25 160 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 PLET1Q6UQ28 207 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 NOXA1Q86UR1 476 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 COMMD7Q86VX2 200 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 COMMD2Q86X83 199 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8H3Q8N146 312 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM58AQ8N1B3 248 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FTMTQ8N4E7 242 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM104Q8NE00 496 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR8D4Q8NGM9 314 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR9G4Q8NGQ1 327 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR10X1Q8NGY0 326 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR6N2Q8NGY6 317 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OR2T4Q8NH00 348 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RHOXF1Q8NHV9 184 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GRPEL2Q8TAA5 225 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 HAVCR2Q8TDQ0 301 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MRGPRDQ8TDS7 321 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RASSF5Q8WWW0 418 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 AP3S1Q92572 193 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM106AQ96A25 262 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CREB3L1Q96BA8 519 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FLYWCH2Q96CP2 140 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CYYR1Q96J86 154 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 OPALINQ96PE5 141 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SPACA5Q96QH8 159 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CLCC1Q96S66 551 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MGLLQ99685 303 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CCDC32Q9BV29 185 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GGTLC1Q9BX51 225 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 C1QTNF4Q9BXJ3 329 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GABARAPL3Q9BY60 117 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 NMNAT2Q9BZQ4 307 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 PBOV1Q9GZY1 135 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MED28Q9H204 178 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GAL3ST2Q9H3Q3 398 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RGCCQ9H4X1 137 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SLA2Q9H6Q3 261 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 FAM206AQ9NX38 181 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 TAS2R3Q9NYW6 316 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CALYQ9NYX4 217 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 IDI2-AS1Q9NZ38 188 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ZNF581Q9P0T4 197 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 EXTL2Q9UBQ6 330 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 CLEC2DQ9UHP7 191 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GLS2Q9UI32 602 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 KIF25Q9UIL4 384 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 SPATA2Q9UM82 520 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 GSTK1Q9Y2Q3 226 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 RPL36Q9Y3U8 105 aaKnown RBP2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 HSPB11Q9Y547 144 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 NUBP2Q9Y5Y2 271 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 ENPP4Q9Y6X5 453 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 AGRNO00468 2067 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 DNAH8Q96JB1 4490 aa2.17□□□□□ -2.06
CHMP4A-208ENST00000534106 MEIKINA0A087WXM9 373 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 LOC102724200A0A096LPH7 203 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1B0GUV1 79 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TMEM269A0A1B0GVZ9 245 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1W2PQL4 384 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 A0A1W2PRQ8 180 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 IRGMA1A4Y4 181 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SNTNA6NMZ2 147 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SLC33A1O00400 549 aaPredicted RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 DEGS1O15121 323 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MRPS14O60783 128 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SCO1O75880 301 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 HLA-AP01891 365 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MT-ND4P03905 459 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 TRGV3P03979 118 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SEMG1P04279 462 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 IFNA4P05014 189 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RPL35AP18077 110 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 GABRB1P18505 474 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 PSMA1P25786 263 aaKnown RBP2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 CD1BP29016 333 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 SSTR5P35346 364 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 GLP1RP43220 463 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MAGEA2P43356 314 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 ETV1P50549 477 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 RAB7AP51149 207 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MFAP2P55001 183 aa2.16□□□□□ -2.06
CHMP4A-208ENST00000534106 MFAP4P55083 255 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms