RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	SRSF12	Q8WXF0	261 aa	Known RBP	13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	SLC25A46	Q96AG3	418 aa		13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	S100A16	Q96FQ6	103 aa	Known RBP	13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.63	□□□□□ -0.23
BBS1-223	ENST00000533644	CREBL2	O60519	120 aa	Predicted RBP	13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	PPY	P01298	95 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	ECI1	P42126	302 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	TNXA	Q16473	311 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	OR2B11	Q5JQS5	317 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	ZNF66	Q6ZN08	573 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	ZNF429	Q86V71	674 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	SAMD12	Q8N8I0	201 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	KCTD12	Q96CX2	325 aa	Known RBP	13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	PRR25	Q96S07	402 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	B9D2	Q9BPU9	175 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	FUNDC2	Q9BWH2	189 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	TINAGL1	Q9GZM7	467 aa	Predicted RBP	13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	ZNF355P	Q9NSJ1	428 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	TAS2R8	Q9NYW2	309 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	ANAPC10	Q9UM13	185 aa		13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	LSM4	Q9Y4Z0	139 aa	Known RBP	13.62	□□□□□ -0.23
BBS1-223	ENST00000533644	DNAH9	Q9NYC9	4486 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644		A0A0G2JLM5	398 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	MSGN1	A6NI15	193 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	TAS2R20	P59543	309 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	NCS1	P62166	190 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	TMEM69	Q5SWH9	247 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	MMD2	Q8IY49	270 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	MFSD4A	Q8N468	514 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	ADAD2	Q8NCV1	583 aa	Known RBP	13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	OR5AP2	Q8NGF4	316 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	TCTEX1D2	Q8WW35	142 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	ACOT12	Q8WYK0	555 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	DCUN1D5	Q9BTE7	237 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	CCL28	Q9NRJ3	127 aa		13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.61	□□□□□ -0.23
BBS1-223	ENST00000533644	C13orf42	A0A1B0GVH6	325 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	FCER2	P06734	321 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	OR9G9	P0C7N8	305 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	ACSM6	Q6P461	480 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	ZBTB34	Q8NCN2	500 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	SECTM1	Q8WVN6	248 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	GIMAP1	Q8WWP7	306 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	GPHA2	Q96T91	129 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	PHB2	Q99623	299 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	COA4	Q9NYJ1	87 aa		13.6	□□□□□ -0.23
BBS1-223	ENST00000533644	MEIS3P1	A6NDR6	274 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	KBTBD11	O94819	623 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	SMIM18	P0DKX4	95 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	APELA	P0DMC3	54 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	KIR2DS2	P43631	304 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	DYRK1A	Q13627	763 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	C10orf55	Q5SWW7	151 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	VKORC1L1	Q8N0U8	176 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	PUSL1	Q8N0Z8	303 aa	Known RBP	13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	VSTM2A	Q8TAG5	236 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	TMEM167A	Q8TBQ9	72 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	USMG5	Q96IX5	58 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	SPIN2A	Q99865	258 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	SPIN2B	Q9BPZ2	258 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	RANGRF	Q9HD47	186 aa	Predicted RBP	13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	IFT46	Q9NQC8	304 aa		13.59	□□□□□ -0.23
BBS1-223	ENST00000533644	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	SAP30	O75446	220 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	RBMXL2	O75526	392 aa	Known RBP	13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	ACTL6B	O94805	426 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	OR2A4	O95047	310 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	NAT1	P18440	290 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	ZP3	P21754	424 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	VBP1	P61758	197 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	CD69	Q07108	199 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF343	Q6P1L6	599 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	CMTM3	Q96MX0	182 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	OR2A7	Q96R45	310 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	SLC5A7	Q9GZV3	580 aa		13.58	□□□□□ -0.24
BBS1-223	ENST00000533644	MPPED1	O15442	326 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	TNFSF12	O43508	249 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	APOA1	P02647	267 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	EIF4E	P06730	217 aa	Known RBP	13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	DEFA5	Q01523	94 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	C11orf87	Q6NUJ2	197 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	TTC9C	Q8N5M4	171 aa		13.57	□□□□□ -0.24
BBS1-223	ENST00000533644	TRBV9	A0A0B4J1U6	114 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	TEX22	C9J3V5	150 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	HRAS	P01112	189 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	PRSS3	P35030	304 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	MAS1L	P35410	378 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	FXYD4	P59646	89 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF45	Q02386	682 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	CATR1	Q13166	79 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	DHRS11	Q6UWP2	260 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	ZNF818P	Q6ZRF7	136 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	SPAG16	Q8N0X2	631 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	EHF	Q9NZC4	300 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	COMMD3	Q9UBI1	195 aa		13.56	□□□□□ -0.24
BBS1-223	ENST00000533644	ANKRD34B	A5PLL1	514 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	FAM223B	A6NKX1	122 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	SULT1C2	O00338	296 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	GABARAP	O95166	117 aa		13.55	□□□□□ -0.24
BBS1-223	ENST00000533644	TAS2R46	P59540	309 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms