RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TATDN3Q17R31 274 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 MRGPRG-AS1Q2M3A8 158 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 ANKRD13BQ86YJ7 626 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 OR5H6Q8NGV6 325 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 HSD17B10Q99714 261 aaKnown RBP11.86□□□□□ -0.51
CPSF1-211ENST00000533492 DIABLOQ9NR28 239 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 PEF1Q9UBV8 284 aaKnown RBP11.86□□□□□ -0.51
CPSF1-211ENST00000533492 SPATA2Q9UM82 520 aa11.86□□□□□ -0.51
CPSF1-211ENST00000533492 IGKV1D-13A0A0B4J2D9 117 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 SAA1P0DJI8 122 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-211ENST00000533492 IGKV1-13P0DP09 117 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 RPL30P62888 115 aaKnown RBP11.85□□□□□ -0.51
CPSF1-211ENST00000533492 DEFA5Q01523 94 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 ADAD2Q8NCV1 583 aaKnown RBP11.85□□□□□ -0.51
CPSF1-211ENST00000533492 BEST4Q8NFU0 473 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 SPIN2AQ99865 258 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 SPIN2BQ9BPZ2 258 aa11.85□□□□□ -0.51
CPSF1-211ENST00000533492 ZNF430Q9H8G1 570 aaPredicted RBP11.85□□□□□ -0.51
CPSF1-211ENST00000533492 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 A6NJ64 397 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
CPSF1-211ENST00000533492 KCTD21Q4G0X4 260 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 ZNF343Q6P1L6 599 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 OVCH2Q7RTZ1 564 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 MFSD4AQ8N468 514 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 OR4S2Q8NH73 311 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 VSTM2AQ8TAG5 236 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 SLC25A38Q96DW6 304 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 TAS2R8Q9NYW2 309 aa11.84□□□□□ -0.51
CPSF1-211ENST00000533492 OR2A4O95047 310 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 IGLV2-14P01704 120 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 FCGR2CP31995 323 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 SYNJ2BPP57105 145 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 DYRK1AQ13627 763 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 RPEL1Q2QD12 228 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 TIMM50Q3ZCQ8 353 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 ZNF66Q6ZN08 573 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 HAPLN4Q86UW8 402 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 HOGA1Q86XE5 327 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 OR9G4Q8NGQ1 327 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 SECTM1Q8WVN6 248 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 SNAPC3Q92966 411 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 OR2A7Q96R45 310 aa11.83□□□□□ -0.52
CPSF1-211ENST00000533492 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 TRIM64CA6NLI5 447 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 TMEM127O75204 238 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 HRASP01112 189 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 IGLV1-51P01701 117 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 PRH1P02810 166 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 RHOGP84095 191 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 ATP5G2Q06055 141 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 C10orf55Q5SWW7 151 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 SLC25A42Q86VD7 318 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 SBSPONQ8IVN8 264 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 VCX3AQ9NNX9 186 aa11.82□□□□□ -0.52
CPSF1-211ENST00000533492 DPPA5A6NC42 116 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 H0Y980 276 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 TNFSF12O43508 249 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 TRBV12-3P01733 135 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 FCER2P06734 321 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 FRMD6-AS1P0C7T7 363 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 PTHLHP12272 177 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 KIR2DS2P43631 304 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 CBX5P45973 191 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
CPSF1-211ENST00000533492 CROCCP3Q8IVE0 287 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 TTC9CQ8N5M4 171 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 OR13F1Q8NGS4 319 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 S100A16Q96FQ6 103 aaKnown RBP11.81□□□□□ -0.52
CPSF1-211ENST00000533492 FYTTD1Q96QD9 318 aaKnown RBP11.81□□□□□ -0.52
CPSF1-211ENST00000533492 AIFM2Q9BRQ8 373 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 AKIP1Q9NQ31 210 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 CCL28Q9NRJ3 127 aa11.81□□□□□ -0.52
CPSF1-211ENST00000533492 HMX3A6NHT5 357 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 AIREO43918 545 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 RBMXL2O75526 392 aaKnown RBP11.8□□□□□ -0.52
CPSF1-211ENST00000533492 KBTBD11O94819 623 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 PPYP01298 95 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 MAS1LP35410 378 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 RPL27AP46776 148 aaKnown RBP11.8□□□□□ -0.52
CPSF1-211ENST00000533492 EXOSC2Q13868 293 aaKnown RBP11.8□□□□□ -0.52
CPSF1-211ENST00000533492 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 NECAP1Q8NC96 275 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 ZBTB34Q8NCN2 500 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 TMEM167AQ8TBQ9 72 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 GPHA2Q96T91 129 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 SLC5A7Q9GZV3 580 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 IFT46Q9NQC8 304 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 PEMTQ9UBM1 199 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 ADAM30Q9UKF2 790 aa11.8□□□□□ -0.52
CPSF1-211ENST00000533492 A0A087WXM4 84 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 TRBV9A0A0B4J1U6 114 aa11.79□□□□□ -0.52
CPSF1-211ENST00000533492 MEIS3P1A6NDR6 274 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms