RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 OSR1Q8TAX0 266 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 DDB2Q92466 427 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 DCUN1D5Q9BTE7 237 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 DCSTAMPQ9H295 470 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 SPATA2Q9UM82 520 aa17.07■□□□□ 0.32
TRAPPC4-210ENST00000531290 TRAV18A0A075B6X5 111 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 LINC00473A8K010 186 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 ACTL6BO94805 426 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 RPS19P39019 145 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 IDO2Q6ZQW0 420 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 OR9G4Q8NGQ1 327 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 OR5H6Q8NGV6 325 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 ACOT12Q8WYK0 555 aa17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 S100A16Q96FQ6 103 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-210ENST00000531290 TMEM235A6NFC5 223 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 CREBL2O60519 120 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 TGFBR1P36897 503 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 SYNJ2BPP57105 145 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 ZNF343Q6P1L6 599 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 ZNF645Q8N7E2 425 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 OR13F1Q8NGS4 319 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 PRELID3BQ9Y3B1 194 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 OR2W1Q9Y3N9 320 aa17.05■□□□□ 0.32
TRAPPC4-210ENST00000531290 SLC22A5O76082 557 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 OR9G9P0C7N8 305 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 NFYAP23511 347 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 DEFA5Q01523 94 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 DYRK1AQ13627 763 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 MRGPRG-AS1Q2M3A8 158 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 SGPP2Q8IWX5 399 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 ADAD2Q8NCV1 583 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 NUDCD2Q8WVJ2 157 aa17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 SRSF12Q8WXF0 261 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 MRPS26Q9BYN8 205 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-210ENST00000531290 H0Y980 276 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 FCGR3BO75015 233 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 TUSC2O75896 110 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 RPEL1Q2QD12 228 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 Q8N1Y9 231 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 MUC7Q8TAX7 377 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 SNAPC3Q92966 411 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 SLC25A38Q96DW6 304 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 SPIN2AQ99865 258 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 SPIN2BQ9BPZ2 258 aa17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 MRPS7Q9Y2R9 242 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-210ENST00000531290 HLA-DQB1P01920 261 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 IGHV4-30-4P0DP06 118 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 VBP1P61758 197 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 CDK10Q15131 360 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 UBE2NLQ5JXB2 153 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 CNIH2Q6PI25 160 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 KCTD9Q7L273 389 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 MMD2Q8IY49 270 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 SLC25A46Q96AG3 418 aa17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 KCTD12Q96CX2 325 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 ZNF430Q9H8G1 570 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 RBMX2Q9Y388 322 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-210ENST00000531290 SORL1Q92673 2214 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 TRBV12-3P01733 135 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 SAA1P0DJI8 122 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 SMIM18P0DKX4 95 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 NCS1P62166 190 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 RHOGP84095 191 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 ATP5G2Q06055 141 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 IL34Q6ZMJ4 242 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 SAMD12Q8N8I0 201 aa17.01■□□□□ 0.31
TRAPPC4-210ENST00000531290 FAM223BA6NKX1 122 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 OR2B11Q5JQS5 317 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 GPR141Q7Z602 305 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 FAM223AQ8IWN6 122 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 AKIP1Q9NQ31 210 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 ANXA10Q9UJ72 324 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 STAB2Q8WWQ8 2551 aa17■□□□□ 0.31
TRAPPC4-210ENST00000531290 RBMXL2O75526 392 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 PRH1P02810 166 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 CBX5P45973 191 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 RORCP51449 518 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 ARPC4P59998 168 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 RPL30P62888 115 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 SLC25A42Q86VD7 318 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 HSD17B10Q99714 261 aaKnown RBP16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 AUNIPQ9H7T9 357 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 SIGLEC8Q9NYZ4 499 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 PEMTQ9UBM1 199 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 ADAM30Q9UKF2 790 aa16.99■□□□□ 0.31
TRAPPC4-210ENST00000531290 SMIM31A0A1B0GVY4 71 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 A8MZ25 164 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 XRCC3O43542 346 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 SSX5O60225 188 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 OR2A4O95047 310 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 CSN3P07498 182 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 TMEM69Q5SWH9 247 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 GPR107Q5VW38 600 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 LCN12Q6JVE5 192 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 TTC9CQ8N5M4 171 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 OR4S2Q8NH73 311 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 VSTM2AQ8TAG5 236 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 TCTEX1D2Q8WW35 142 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 C19orf73Q9NVV2 129 aa16.98■□□□□ 0.31
TRAPPC4-210ENST00000531290 COMMD3Q9UBI1 195 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms