RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 CA3P07451 260 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 FCGR2AP12318 317 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 CMPK1P30085 196 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SLC35B1P78383 322 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SSBP2P81877 361 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-219ENST00000531050 KIR3DS1Q14943 382 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 TMEM164Q5U3C3 297 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 FA2HQ7L5A8 372 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF418Q8TF45 676 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-219ENST00000531050 COX14Q96I36 57 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 LYRM4Q9HD34 91 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 TNFRSF19Q9NS68 423 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SERTAD4Q9NUC0 356 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 KCNIP1Q9NZI2 227 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 CPAMD8Q8IZJ3 1885 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 ZNF716A6NP11 495 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 NPIPA5E9PKD4 350 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 E9PLN8 166 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 NPIPA3F8WFD2 350 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 SYS1-DBNDD2H3BUS1 97 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 PRKNO60260 465 aaPredicted RBP6.53□□□□□ -1.36
PTPRK-219ENST00000531050 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 COX5AP20674 150 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 FABP6P51161 128 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 COX19Q49B96 90 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 LINC00173Q6ZV60 143 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 OR2T6Q8NHC8 308 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 GALMQ96C23 342 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 TM4SF19Q96DZ7 209 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 GPR82Q96P67 336 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 NPIPA1Q9UND3 350 aa6.53□□□□□ -1.36
PTPRK-219ENST00000531050 IGKV1D-13A0A0B4J2D9 117 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 A6NDN8 102 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 H0Y980 276 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 IGKV1-13P0DP09 117 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 CD38P28907 300 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 RPS15AP62244 130 aaKnown RBP6.52□□□□□ -1.37
PTPRK-219ENST00000531050 ATP5G2Q06055 141 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 IGF2-ASQ6U949 168 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 SPACA3Q8IXA5 215 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 TPRX1Q8N7U7 411 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 PIGTQ969N2 578 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 CLDN23Q96B33 292 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 SPAG8Q99932 426 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-219ENST00000531050 MS4A5Q9H3V2 200 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 HILPDAQ9Y5L2 63 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 USP34Q70CQ2 3546 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 C17orf51A8MQB3 221 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 ISLRO14498 428 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 CNIH1O95406 144 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 MT-ATP6P00846 226 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 COX8AP10176 69 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 TFF3Q07654 80 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 KLF5Q13887 457 aaPredicted RBP6.52□□□□□ -1.37
PTPRK-219ENST00000531050 ZNF585BQ52M93 769 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 SPANXN5Q5MJ07 72 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.37
PTPRK-219ENST00000531050 SHISA6Q6ZSJ9 500 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 BPIFA4PQ86YQ2 179 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 OR1L1Q8NH94 360 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 URB1-AS1Q96HZ7 61 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 CHRNA10Q9GZZ6 450 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 MS4A6AQ9H2W1 248 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 CACNG5Q9UF02 275 aa6.52□□□□□ -1.37
PTPRK-219ENST00000531050 SH2D7A6NKC9 451 aaPredicted RBP6.51□□□□□ -1.37
PTPRK-219ENST00000531050 SNAI2O43623 268 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 ANGPTL7O43827 346 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 CLDN14O95500 239 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 NUDT14O95848 222 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 APOA2P02652 100 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 TCL1AP56279 114 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 RPL32P62910 135 aaKnown RBP6.51□□□□□ -1.37
PTPRK-219ENST00000531050 WDR5BQ86VZ2 330 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 LMX1AQ8TE12 382 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 LYZL4Q96KX0 146 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 KCNK17Q96T54 332 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 TRAPPC2LQ9UL33 140 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 ZNF257Q9Y2Q1 563 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 SPACA6W5XKT8 324 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 KIAA1549Q9HCM3 1950 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 TDRD6O60522 2096 aaKnown RBP6.51□□□□□ -1.37
PTPRK-219ENST00000531050 PRRC2BQ5JSZ5 2229 aaKnown RBP6.51□□□□□ -1.37
PTPRK-219ENST00000531050 A0A0J9YY10 115 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 A0A1B0GX78 115 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 J3QR89 54 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 PRNPP04156 253 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 FABP2P12104 132 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 IL11P20809 199 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 IL12BP29460 328 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 GAGE5Q13069 117 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 GAGE6Q13070 117 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 GPM6BQ13491 265 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 TMEM14EPQ6UXP3 125 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 ACP7Q6ZNF0 438 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 TMEM251Q8N6I4 163 aa6.51□□□□□ -1.37
PTPRK-219ENST00000531050 RLN3Q8WXF3 142 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms