RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 S100GP29377 79 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 VDAC2P45880 294 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-220ENST00000530567 UBE2KP61086 200 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 LIN54Q6MZP7 749 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 VKORC1L1Q8N0U8 176 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 CD300LFQ8TDQ1 290 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 WNT10AQ9GZT5 417 aa16.85■□□□□ 0.29
CAPN1-220ENST00000530567 NAP1L6A6NFF2 107 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 S1PR2O95136 353 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 SAA1P0DJI8 122 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-220ENST00000530567 SSBP2P81877 361 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-220ENST00000530567 NDPQ00604 133 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 SLC35E3Q7Z769 313 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 TCTEX1D1Q8N7M0 179 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 POC5Q8NA72 575 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 WFDC12Q8WWY7 111 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 TMEM230Q96A57 120 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 C7orf50Q9BRJ6 194 aaKnown RBP16.84■□□□□ 0.29
CAPN1-220ENST00000530567 TNCP24821 2201 aa16.84■□□□□ 0.29
CAPN1-220ENST00000530567 HPRT1P00492 218 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 CCR6P51684 374 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 KRTAP10-3P60369 221 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 PJVKQ0ZLH3 352 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 PLGLAQ15195 96 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 CCDC71LQ8N9Z2 235 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 WIPF2Q8TF74 440 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-220ENST00000530567 PLEKHA2Q9HB19 425 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 FAM212BQ9NTI7 297 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-220ENST00000530567 COPZ2Q9P299 210 aa16.83■□□□□ 0.28
CAPN1-220ENST00000530567 C14orf166Q9Y224 244 aaKnown RBP16.83■□□□□ 0.28
CAPN1-220ENST00000530567 H0Y980 276 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 UPK1BO75841 260 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 IFITM3Q01628 133 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 POU2AF1Q16633 256 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 VMA21Q3ZAQ7 101 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 ARSJQ5FYB0 599 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-220ENST00000530567 PPP1R27Q86WC6 154 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 KLHDC1Q8N7A1 406 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 TEX45Q8NA69 505 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 ADAD2Q8NCV1 583 aaKnown RBP16.82■□□□□ 0.28
CAPN1-220ENST00000530567 RHOVQ96L33 236 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 TP53RKQ96S44 253 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 SLC25A21Q9BQT8 299 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-220ENST00000530567 COMMD9Q9P000 198 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 TBC1D24Q9ULP9 559 aa16.82■□□□□ 0.28
CAPN1-220ENST00000530567 KCNAB3O43448 404 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 CA2P00918 260 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 LPAR6P43657 344 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 TAS2R31P59538 309 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 CX3CL1P78423 397 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 C12orf54Q6X4T0 127 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 PUSL1Q8N0Z8 303 aaKnown RBP16.81■□□□□ 0.28
CAPN1-220ENST00000530567 NOL4LQ96MY1 436 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-220ENST00000530567 SCGB3A2Q96PL1 93 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 CLCC1Q96S66 551 aa16.81■□□□□ 0.28
CAPN1-220ENST00000530567 C3orf85A0A1B0GTC6 90 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 CRYM-AS1A6NIL9 109 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 HAX1O00165 279 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 LYRM1O43325 122 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 HRASP01112 189 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 IGKV1-39P01597 117 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 IGKV1D-39P04432 117 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 PRSS8Q16651 343 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 OR51J1Q9H342 316 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 NAA60Q9H7X0 242 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 LINC00527Q9UJ94 153 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 FBXO7Q9Y3I1 522 aa16.8■□□□□ 0.28
CAPN1-220ENST00000530567 CENPXA8MT69 81 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ARPC1BO15143 372 aaKnown RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ATP6V0E1O15342 81 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 IGF1P05019 195 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 NQO2P16083 231 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 RBMS2Q15434 407 aaKnown RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 OR4A47Q6IF82 309 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ZNF562Q6V9R5 426 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 SSX9Q7RTT3 188 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 R3HDM4Q96D70 268 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ZNF580Q9UK33 172 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 AP4M1O00189 453 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 KBTBD11O94819 623 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 OR2A4O95047 310 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 NDUFB6O95139 128 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 IL6RP08887 468 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 EGR2P11161 476 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 UCP1P25874 307 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 SRSF4Q08170 494 aaKnown RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 SP6Q3SY56 376 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 FOXRED2Q8IWF2 684 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 STPG2Q8N412 459 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 TMEM167AQ8TBQ9 72 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 OR2A7Q96R45 310 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ZNF747Q9BV97 191 aa16.79■□□□□ 0.28
CAPN1-220ENST00000530567 ZNF430Q9H8G1 570 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-220ENST00000530567 MARCH11A6NNE9 402 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 OR5AC1P0C628 307 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 SUPT4H1P63272 117 aaKnown RBP16.78■□□□□ 0.28
CAPN1-220ENST00000530567 ASAH1Q13510 395 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 C10orf99Q6UWK7 81 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 VSTM2AQ8TAG5 236 aa16.78■□□□□ 0.28
CAPN1-220ENST00000530567 PARP11Q9NR21 331 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms