RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, human

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-215	ENST00000528965	TIMM50	Q3ZCQ8	353 aa		11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	IL34	Q6ZMJ4	242 aa		11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	ADAD2	Q8NCV1	583 aa	Known RBP	11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	SRSF12	Q8WXF0	261 aa	Known RBP	11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	ACOT12	Q8WYK0	555 aa		11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	OR51E2	Q9H255	320 aa		11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	KCNK7	Q9Y2U2	307 aa		11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.91	□□□□□ -0.5
CTSB-215	ENST00000528965	TENM2	Q9NT68	2774 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SHISA3	A0PJX4	238 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	MFNG	O00587	321 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SCGN	O76038	276 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	TNFAIP8	O95379	198 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	TRBV12-3	P01733	135 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	CSN3	P07498	182 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	APELA	P0DMC3	54 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	DUT	P33316	252 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SDC2	P34741	201 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	RHOG	P84095	191 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	EXOSC2	Q13868	293 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	LAX1	Q8IWV1	398 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	IL17D	Q8TAD2	202 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SPIN2A	Q99865	258 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SPIN2B	Q9BPZ2	258 aa		11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	MRPS7	Q9Y2R9	242 aa	Known RBP	11.9	□□□□□ -0.5
CTSB-215	ENST00000528965	SRRM4	A7MD48	611 aa	Known RBP	11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	ATP5G2	Q06055	141 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	PLA2G7	Q13093	441 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	CDNF	Q49AH0	187 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	IDNK	Q5T6J7	187 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965		Q6ZS49	121 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	SLC25A42	Q86VD7	318 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	TSPAN14	Q8NG11	270 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	DYNLRB2	Q8TF09	96 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	MAFIP	Q8WZ33	124 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	DDB2	Q92466	427 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	C5orf30	Q96GV9	206 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	THAP7	Q9BT49	309 aa	Predicted RBP	11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	SLC2A8	Q9NY64	477 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	PRELID3B	Q9Y3B1	194 aa		11.89	□□□□□ -0.51
CTSB-215	ENST00000528965	SLC22A5	O76082	557 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	TPPP	O94811	219 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	DTYMK	P23919	212 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	CDK10	Q15131	360 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	IDO2	Q6ZQW0	420 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	MMD2	Q8IY49	270 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	ZNF645	Q8N7E2	425 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	DCUN1D5	Q9BTE7	237 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	AKIP1	Q9NQ31	210 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	CEPT1	Q9Y6K0	416 aa		11.88	□□□□□ -0.51
CTSB-215	ENST00000528965	RAB27B	O00194	218 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	JTB	O76095	146 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	CTXN2	P0C2S0	81 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	SAA1	P0DJI8	122 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	GNG2	P59768	71 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	CD81	P60033	236 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	SFXN4	Q6P4A7	337 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	KCTD9	Q7L273	389 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	NECAP1	Q8NC96	275 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	KCTD12	Q96CX2	325 aa	Known RBP	11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	ST6GALNAC5	Q9BVH7	336 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	ZNF430	Q9H8G1	570 aa	Predicted RBP	11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	ADAM30	Q9UKF2	790 aa		11.87	□□□□□ -0.51
CTSB-215	ENST00000528965	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	LINC00473	A8K010	186 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	BMPR1B	O00238	502 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	MRGPRG-AS1	Q2M3A8	158 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	CROCCP3	Q8IVE0	287 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	TTC9C	Q8N5M4	171 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	VSTM2A	Q8TAG5	236 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	PLEKHA3	Q9HB20	300 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	DIABLO	Q9NR28	239 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	ZNF257	Q9Y2Q1	563 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	RYR2	Q92736	4967 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	TNC	P24821	2201 aa		11.86	□□□□□ -0.51
CTSB-215	ENST00000528965	TRBV9	A0A0B4J1U6	114 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	DPPA5	A6NC42	116 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	IZUMO1R	A6ND01	250 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	FCGR3B	O75015	233 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	PRH1	P02810	166 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	CLEC2L	P0C7M8	214 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	C15orf32	Q32M92	178 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	CD300E	Q496F6	205 aa	Predicted RBP	11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	NR2C2AP	Q86WQ0	139 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	OR4S2	Q8NH73	311 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	LGALS14	Q8TCE9	139 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	NEURL2	Q9BR09	285 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	RNF167	Q9H6Y7	350 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	RHBDL2	Q9NX52	303 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	GAR1	Q9NY12	217 aa	Known RBP	11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	OR2W1	Q9Y3N9	320 aa		11.85	□□□□□ -0.51
CTSB-215	ENST00000528965	RBMXL2	O75526	392 aa	Known RBP	11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	DHFR	P00374	187 aa		11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	MECP2	P51608	486 aa	Known RBP	11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	LSM3	P62310	102 aa	Known RBP	11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	ZNF45	Q02386	682 aa		11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	ADAMTSL5	Q6ZMM2	481 aa		11.84	□□□□□ -0.51
CTSB-215	ENST00000528965	HSD17B10	Q99714	261 aa	Known RBP	11.84	□□□□□ -0.51

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