RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 CMSS1Q9BQ75 279 aaKnown RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 ZNF251Q9BRH9 671 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 C7orf50Q9BRJ6 194 aaKnown RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 AGMATQ9BSE5 352 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 PARP12Q9H0J9 701 aaKnown RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 IFI27L2Q9H2X8 130 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 RNF167Q9H6Y7 350 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 CHMP1AQ9HD42 196 aaPredicted RBP6.65□□□□□ -1.34
SSBP3-212ENST00000528930 MCUBQ9NWR8 336 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 ABRACLQ9P1F3 81 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 ALG5Q9Y673 324 aa6.65□□□□□ -1.34
SSBP3-212ENST00000528930 SAA2-SAA4A0A096LPE2 208 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 A0A0B4J293 547 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 IGKV1-6A0A0C4DH72 117 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 FAM240BA0A1B0GVZ2 78 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 INMT-MINDY4F8WBC2 141 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 MFNGO00587 321 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 LYRM1O43325 122 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 PROP1O75360 226 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 DHFRP00374 187 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 CLEC2LP0C7M8 214 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 SAA2P0DJI9 122 aaPredicted RBP6.64□□□□□ -1.35
SSBP3-212ENST00000528930 GNB3P16520 340 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 ZP3P21754 424 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 SLC6A1P30531 599 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 TGFBR1P36897 503 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 F2RL1P55085 397 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 NSUN5P1Q3KNT7 163 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 FAM131AQ6UXB0 335 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 TPRA1Q86W33 373 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 FAM71E2Q8N5Q1 922 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 OR2AK2Q8NG84 335 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 RAB3CQ96E17 227 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 DIRAS2Q96HU8 199 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 RCC1LQ96I51 464 aaKnown RBP6.64□□□□□ -1.35
SSBP3-212ENST00000528930 RITA1Q96K30 269 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 KCTD7Q96MP8 289 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 S1PR3Q99500 378 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 MRPL20Q9BYC9 149 aaKnown RBP6.64□□□□□ -1.35
SSBP3-212ENST00000528930 TOLLIPQ9H0E2 274 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 ABCG5Q9H222 651 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 MIXL1Q9H2W2 232 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 OR1A1Q9P1Q5 309 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 SLC23A1Q9UHI7 598 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 LINC00527Q9UJ94 153 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 MGAT4AQ9UM21 535 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 LSM4Q9Y4Z0 139 aaKnown RBP6.64□□□□□ -1.35
SSBP3-212ENST00000528930 HSPB11Q9Y547 144 aa6.64□□□□□ -1.35
SSBP3-212ENST00000528930 RPS10-NUDT3A0A1W2PQS6 291 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 NCBP2LA6PVI3 153 aaKnown RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 TRDCB7Z8K6 153 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 DUS4LO95620 317 aaKnown RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 CT45A6P0DMU7 189 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 CT45A5P0DMU8 189 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 CT45A7P0DMV0 189 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 HIST1H1DP16402 221 aaKnown RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 ZBTB25P24278 435 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 CEACAM6P40199 344 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 DHODHQ02127 395 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 TRIQKQ629K1 86 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 FAM71F2Q6NXP2 309 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 SFXN4Q6P4A7 337 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 TMEM65Q6PI78 240 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 OVCH2Q7RTZ1 564 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 OR8H1Q8NGG4 311 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF431Q8TF32 576 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 ABHD14BQ96IU4 210 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 NOL4LQ96MY1 436 aaPredicted RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 ASCL2Q99929 193 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 LIN7CQ9NUP9 197 aaKnown RBP6.63□□□□□ -1.35
SSBP3-212ENST00000528930 PIPOXQ9P0Z9 390 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 UBQLN2Q9UHD9 624 aa6.63□□□□□ -1.35
SSBP3-212ENST00000528930 DNAH10Q8IVF4 4471 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 IGKV1D-8A0A087WSZ0 117 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 TCRBV4S1A1TA0A5B7 111 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 PSMB11A5LHX3 300 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 METTL21EPA6NDL7 271 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 SERPINE3A8MV23 424 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 RAB29O14966 203 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 RGS5O15539 181 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 FABP7O15540 132 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 FCGR3AP08637 254 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 CD3GP09693 182 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ANXA3P12429 323 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 CNTFRP26992 372 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 CBX5P45973 191 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 GPR12P47775 334 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ACTBP60709 375 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 FLI1Q01543 452 aaPredicted RBP6.62□□□□□ -1.35
SSBP3-212ENST00000528930 MXD1Q05195 221 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 PYDC2Q56P42 97 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 RPL39P5Q59GN2 51 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 IGSF11Q5DX21 431 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 SLC35E3Q7Z769 313 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 ZNF329Q86UD4 541 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 LINC00518Q8N0U6 118 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 STPG2Q8N412 459 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 OR4X2Q8NGF9 303 aa6.62□□□□□ -1.35
SSBP3-212ENST00000528930 OR4A4PQ8NGN8 299 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms