RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 SHOXO15266 292 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 NBR2O15453 112 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 TCF21O43680 179 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 FCGR3BO75015 233 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 BRI3O95415 125 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 IGKV1D-33P01593 117 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 IGKV1-33P01594 117 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 IGHV3-7P01780 117 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 HLA-AP01891 365 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 HLA-DRB1P01911 266 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 RLN1P04808 185 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 RNASE1P07998 156 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 CCR6P51684 374 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 ATP5IP56385 69 aaPredicted RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 CYCSP99999 105 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 DHRS2Q13268 280 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 TMEM187Q14656 261 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 TRIM16LQ309B1 348 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 ZNF585BQ52M93 769 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 PDLIM3Q53GG5 364 aaPredicted RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 ZNF562Q6V9R5 426 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 C5orf24Q7Z6I8 188 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 PPP1R27Q86WC6 154 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 ZNF695Q8IW36 515 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 MRPL41Q8IXM3 137 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 MMD2Q8IY49 270 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 FAM71E2Q8N5Q1 922 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 OR5B3Q8NH48 314 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 OR51H1Q8NH63 302 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 TMEM167AQ8TBQ9 72 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 ZNF431Q8TF32 576 aaPredicted RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 TMEM230Q96A57 120 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 RRNAD1Q96FB5 475 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 RHOVQ96L33 236 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 SPIN2AQ99865 258 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 SMR3AQ99954 134 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 SPIN2BQ9BPZ2 258 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 MRPL20Q9BYC9 149 aaKnown RBP4.98□□□□□ -1.61
MACF1-228ENST00000528611 NPFFR1Q9GZQ6 430 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 PGPEP1Q9NXJ5 209 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 ZNF257Q9Y2Q1 563 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 MOB4Q9Y3A3 225 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 MMP24Q9Y5R2 645 aa4.98□□□□□ -1.61
MACF1-228ENST00000528611 A0A1B0GU03 582 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 A0A1W2PRD5 423 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 A0A1W2PRF3 423 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 A0A1W2PRM7 423 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 DBX1A6NMT0 343 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 MARCH11A6NNE9 402 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 CYSRT1A8MQ03 144 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 INAFM1C9JVW0 142 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 INS-IGF2F8WCM5 200 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 H3BUX3 64 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 RRHO14718 337 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 ARPC1BO15143 372 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 OR2A4O95047 310 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 SCAF4O95104 1147 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 CRYZL1O95825 349 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 IFNA21P01568 189 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 CRYGBP07316 175 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 OR5AC1P0C628 307 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 TMEM11P17152 192 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 AKR1C4P17516 323 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 LPAR6P43657 344 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 CRIP2P52943 208 aaPredicted RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 BRWD1-AS2P59051 145 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 RPS16P62249 146 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 RPL30P62888 115 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 SUPT4H1P63272 117 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 TMEM267Q0VDI3 215 aaPredicted RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 BAMBIQ13145 260 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 PPP1R1AQ13522 171 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 DIAPH2-AS1Q14236 149 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 C5orf64Q2M2E5 130 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 C4orf46Q504U0 113 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 PHLDA2Q53GA4 152 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 UTF1Q5T230 341 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 RUSC1-AS1Q66K80 236 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 LIN54Q6MZP7 749 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 FAM53AQ6NSI3 398 aaPredicted RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 TMED4Q7Z7H5 227 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 PDZD9Q8IXQ8 264 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 PUSL1Q8N0Z8 303 aaKnown RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 DYNAPQ8N1N2 210 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 Q8N2B8 174 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 OR52E5Q8NH55 327 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 WFDC12Q8WWY7 111 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 R3HDM4Q96D70 268 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 C5orf30Q96GV9 206 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 SEC22AQ96IW7 307 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 HARBI1Q96MB7 349 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 ZNF48Q96MX3 618 aaPredicted RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 OR2A7Q96R45 310 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 TP53RKQ96S44 253 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 SLC25A33Q9BSK2 321 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 GSX1Q9H4S2 264 aaPredicted RBP4.97□□□□□ -1.61
MACF1-228ENST00000528611 PLSCR3Q9NRY6 295 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 PRNDQ9UKY0 176 aa4.97□□□□□ -1.61
MACF1-228ENST00000528611 TRAV6A0A075B6T7 132 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms