RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZNF705BP0CI00 300 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 CDC34P49427 236 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 CEBPDP49716 269 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 LHX2P50458 406 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 SPCS3P61009 180 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 RPL30P62888 115 aaKnown RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 H2BFWTQ7Z2G1 175 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 CENPVQ7Z7K6 275 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 SCCPDHQ8NBX0 429 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 BEND2Q8NDZ0 799 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 SDSLQ96GA7 329 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 ZNF71Q9NQZ8 489 aaPredicted RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 FKBP11Q9NYL4 201 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 MRPS18CQ9Y3D5 142 aaKnown RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 CACNA1AO00555 2505 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 C17orf112F2Z3M2 114 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 EREGO14944 169 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 S1PR2O95136 353 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 PAX1P15863 534 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 TM4SF20Q53R12 229 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 NUFIP2Q7Z417 695 aaKnown RBP10.49□□□□□ -0.73
CAPN1-208ENST00000527323 OR52L2PQ8NGH6 319 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 NINJ1Q92982 152 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 GALMQ96C23 342 aa10.49□□□□□ -0.73
CAPN1-208ENST00000527323 A0A1W2PPV4 95 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 NDUFB4O95168 129 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 IL18BPO95998 194 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 G0S2P27469 103 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 PPP1CBP62140 327 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 CATR1Q13166 79 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 OR2M7Q8NG81 312 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 POLDIP2Q9Y2S7 368 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 VENTXO95231 258 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 SELEP16581 610 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 NPPCP23582 126 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 IL3RAP26951 378 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 PDLIM4P50479 330 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 EDDM3BP56851 147 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 CLDN18P56856 261 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 ZNF645Q8N7E2 425 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 FAM173AQ9BQD7 235 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 CBLN4Q9NTU7 201 aa10.48□□□□□ -0.73
CAPN1-208ENST00000527323 TRAV38-1A0A0B4J264 116 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 C17orf98A8MV24 154 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 J3KRW8 73 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 SS18L1O75177 396 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-208ENST00000527323 HNF1AP20823 631 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 A0A1B0GUS0 222 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 PGPEP1LA6NFU8 196 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 ATP5G3P48201 142 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
CAPN1-208ENST00000527323 GCSAMLQ5JQS6 135 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 IGF2-ASQ6U949 168 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 MDP1Q86V88 176 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 Q8IYB0 196 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 GBGT1Q8N5D6 347 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 MS4A10Q96PG2 267 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 CIB3Q96Q77 187 aaPredicted RBP10.47□□□□□ -0.73
CAPN1-208ENST00000527323 USF3Q68DE3 2245 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 C21orf140B9A014 251 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 TEX38Q6PEX7 206 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 DERL1Q9BUN8 251 aa10.47□□□□□ -0.73
CAPN1-208ENST00000527323 INTS1Q8N201 2190 aaKnown RBP10.46□□□□□ -0.73
CAPN1-208ENST00000527323 ASH1LQ9NR48 2969 aaKnown RBP10.46□□□□□ -0.73
CAPN1-208ENST00000527323 PKDREJQ9NTG1 2253 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 C1QTNF9P0C862 333 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 LINC00205P59089 165 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 AESQ08117 197 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 WDR86Q86TI4 376 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 CXorf67Q86X51 503 aaPredicted RBP10.46□□□□□ -0.73
CAPN1-208ENST00000527323 SGMS2Q8NHU3 365 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 TMEM204Q9BSN7 226 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 OR2J1Q9GZK6 312 aa10.46□□□□□ -0.73
CAPN1-208ENST00000527323 PATZ1Q9HBE1 687 aaKnown RBP10.46□□□□□ -0.73
CAPN1-208ENST00000527323 HAND1O96004 215 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 TYMSP04818 313 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 RAB4BP61018 213 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 GNB1P62873 340 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 LCN2P80188 198 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 ZBTB34Q8NCN2 500 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 RFESDQ8TAC1 157 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 MRPL37Q9BZE1 423 aaKnown RBP10.46□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF703Q9H7S9 590 aaPredicted RBP10.46□□□□□ -0.74
CAPN1-208ENST00000527323 MBNL3Q9NUK0 354 aaKnown RBP10.46□□□□□ -0.74
CAPN1-208ENST00000527323 WIPI2Q9Y4P8 454 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 MED12LQ86YW9 2145 aa10.46□□□□□ -0.74
CAPN1-208ENST00000527323 IGHV3-43A0A0B4J1X8 118 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 MDFIC2A0A1B0GVS7 189 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 TMEM30CPA0ZSE6 113 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 PMS2P5A8MQ11 134 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 DEFB108AA8MXU0 73 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 M0R143 59 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 IGHV3-43DP0DP04 118 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 GABRA2P47869 451 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 MEOX1P50221 254 aa10.45□□□□□ -0.74
CAPN1-208ENST00000527323 ZNF705AQ6ZN79 300 aaPredicted RBP10.45□□□□□ -0.74
CAPN1-208ENST00000527323 MRGPRDQ8TDS7 321 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms