RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PPYP01298 95 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 VBP1P61758 197 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 NCS1P62166 190 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 RPL30P62888 115 aaKnown RBP14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 MMD2Q8IY49 270 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 MFSD4AQ8N468 514 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 TCTEX1D2Q8WW35 142 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 ACOT12Q8WYK0 555 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 MS4A10Q96PG2 267 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 DCUN1D5Q9BTE7 237 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 IFT46Q9NQC8 304 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 ANAPC10Q9UM13 185 aa14.26□□□□□ -0.13
TSPAN4-216ENST00000526055 TNCP24821 2201 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 OVOL1O14753 267 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 ACTL6BO94805 426 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 SAA1P0DJI8 122 aaPredicted RBP14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 TAS2R20P59543 309 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 TNXAQ16473 311 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 ZNF429Q86V71 674 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 CASTOR1Q8WTX7 329 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 DCUN1D4Q92564 292 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 SNAPC3Q92966 411 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 BCL7BQ9BQE9 202 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 AIFM2Q9BRQ8 373 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 ZNF355PQ9NSJ1 428 aa14.25□□□□□ -0.13
TSPAN4-216ENST00000526055 C13orf42A0A1B0GVH6 325 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 MSGN1A6NI15 193 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 NOL3O60936 208 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 APOA1P02647 267 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 CTF1Q16619 201 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 DEFB121Q5J5C9 76 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 CLVS1Q8IUQ0 354 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 OR5T1Q8NG75 326 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 RAB2BQ8WUD1 216 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 SECTM1Q8WVN6 248 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 SRSF12Q8WXF0 261 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 USMG5Q96IX5 58 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 PHB2Q99623 299 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 SPIN2AQ99865 258 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 SPIN2BQ9BPZ2 258 aa14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 TINAGL1Q9GZM7 467 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 ALX4Q9H161 411 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 ZNF430Q9H8G1 570 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-216ENST00000526055 IGHV4OR15-8A0A075B7B6 117 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 A0A087WW49 117 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 RBFOX2O43251 390 aaKnown RBP eCLIP14.23□□□□□ -0.133e-6■■□□□ 14.2
TSPAN4-216ENST00000526055 OR2A4O95047 310 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 HRASP01112 189 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 IGHV3-11P01762 117 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 OR9G9P0C7N8 305 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 PTHLHP12272 177 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 NAT1P18440 290 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 ZP3P21754 424 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 PRSS3P35030 304 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 MAS1LP35410 378 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 TMBIM6P55061 237 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 TAS2R46P59540 309 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 CATR1Q13166 79 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 DHRS11Q6UWP2 260 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 IDO2Q6ZQW0 420 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 DLX4Q92988 240 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 OR2A7Q96R45 310 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 SLC5A7Q9GZV3 580 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 NAA50Q9GZZ1 169 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 RANGRFQ9HD47 186 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 CCL28Q9NRJ3 127 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 TAS2R8Q9NYW2 309 aa14.23□□□□□ -0.13
TSPAN4-216ENST00000526055 SMIM31A0A1B0GVY4 71 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 RORCP51449 518 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 OR2B11Q5JQS5 317 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 SLC25A42Q86VD7 318 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 PUSL1Q8N0Z8 303 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 ADAD2Q8NCV1 583 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 TMEM167AQ8TBQ9 72 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 COA4Q9NYJ1 87 aa14.22□□□□□ -0.13
TSPAN4-216ENST00000526055 MPPED1O15442 326 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 KBTBD11O94819 623 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 ECI1P42126 302 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 SLURP1P55000 103 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 BRWD1-AS2P59051 145 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 HERV-K104P61576 105 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 DYRK1AQ13627 763 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 ACSM6Q6P461 480 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 OR4A5Q8NH83 315 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 CD300LFQ8TDQ1 290 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 AP3S1Q92572 193 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 SCPEP1Q9HB40 452 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 EHFQ9NZC4 300 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.13
TSPAN4-216ENST00000526055 MEIS3P1A6NDR6 274 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 EIF4EP06730 217 aaKnown RBP14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 FXYD4P59646 89 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 FAM209BQ5JX69 171 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 ZNF343Q6P1L6 599 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 MZT2AQ6P582 158 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 TTC9CQ8N5M4 171 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 OR5H2Q8NGV7 314 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 B9D2Q9BPU9 175 aa14.2□□□□□ -0.14
TSPAN4-216ENST00000526055 ADAM30Q9UKF2 790 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms