RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 METTL9Q9H1A3 318 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 MS4A6AQ9H2W1 248 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 PARVAQ9NVD7 372 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 ZFHX4Q86UP3 3567 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 A0A1W2PP64 1363 aa1.07□□□□□ -2.24
CD44-215ENST00000525241 DAPL1A0PJW8 107 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 M0R381 172 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 CCRL2O00421 344 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 AZIN1O14977 448 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 PGLYRP1O75594 196 aaPredicted RBP1.06□□□□□ -2.24
CD44-215ENST00000525241 NPYP01303 97 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 HLA-DRAP01903 254 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 CDK9P50750 372 aaKnown RBP1.06□□□□□ -2.24
CD44-215ENST00000525241 SNAP25P60880 206 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 SMAGPQ0VAQ4 97 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 COTL1Q14019 142 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 SLC36A2Q495M3 483 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 OR10K2Q6IF99 312 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 BAP18Q8IXM2 172 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 LRRC34Q8IZ02 419 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 OR8B12Q8NGG6 310 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 Q8WTZ3 238 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 CYGBQ8WWM9 190 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 EMC3Q9P0I2 261 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 KLK5Q9Y337 293 aaPredicted RBP1.06□□□□□ -2.24
CD44-215ENST00000525241 NBEAL2Q6ZNJ1 2754 aa1.06□□□□□ -2.24
CD44-215ENST00000525241 GCN1Q92616 2671 aaKnown RBP1.05□□□□□ -2.24
CD44-215ENST00000525241 RYR1P21817 5038 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
CD44-215ENST00000525241 NCOR1O75376 2440 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CELSR3Q9NYQ7 3312 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 TRAV8-1A0A0A6YYK1 113 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 GOLGA8KD6RF30 607 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 GOLGA8MH3BSY2 632 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CD79BP40259 229 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 GLO1Q04760 184 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CDKL4Q5MAI5 379 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 FAM9CQ8IZT9 166 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 TMEM251Q8N6I4 163 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 OR10D3Q8NH80 312 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 PARD6GQ9BYG4 376 aaPredicted RBP1.05□□□□□ -2.24
CD44-215ENST00000525241 MROQ9BYG7 248 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CYSTM1Q9H1C7 97 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CPAMD8Q8IZJ3 1885 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 GREB1Q4ZG55 1949 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 CCDC168Q8NDH2 2452 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 KALRNO60229 2985 aa1.05□□□□□ -2.24
CD44-215ENST00000525241 ZNF292O60281 2723 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 RTTNQ86VV8 2226 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 MAST2Q6P0Q8 1798 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 RALGAPA2Q2PPJ7 1873 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 IGHV3-64A0A075B6Q5 118 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 LINC00614P0C842 121 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 PET100P0DJ07 73 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 CXCL2P19875 107 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 CXCL3P19876 107 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 GABRA2P47869 451 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 CXCR4P61073 352 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 TMEM258P61165 79 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 RPS24P62847 133 aaKnown RBP1.04□□□□□ -2.24
CD44-215ENST00000525241 BTN3A2P78410 334 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 HPCAP84074 193 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 MLLT11Q13015 90 aaPredicted RBP1.04□□□□□ -2.24
CD44-215ENST00000525241 FAM151BQ6UXP7 276 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 PACRGLQ8N7B6 248 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 OR51T1Q8NGJ9 327 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 C10orf105Q8TEF2 133 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 MS4A6EQ96DS6 147 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 SFRP2Q96HF1 295 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 VCX3BQ9H321 246 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 PARVGQ9HBI0 331 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 TAAR3PQ9P1P4 343 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 HDGFL3Q9Y3E1 203 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 POLR3HQ9Y535 204 aaPredicted RBP1.04□□□□□ -2.24
CD44-215ENST00000525241 ABCC11Q96J66 1382 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 GRIN2BQ13224 1484 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 COL6A6A6NMZ7 2263 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 LRRK2Q5S007 2527 aa1.04□□□□□ -2.24
CD44-215ENST00000525241 PDE4DIPQ5VU43 2346 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 IGKV1D-43A0A0B4J1Z2 117 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 C21orf140B9A014 251 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 TXNDC9O14530 226 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 NIPSNAP2O75323 286 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 IFNGR2P38484 337 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 RPL27AP46776 148 aaKnown RBP1.03□□□□□ -2.24
CD44-215ENST00000525241 CTBP2P56545 445 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 TMEM33P57088 247 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 UBE2IP63279 158 aaKnown RBP1.03□□□□□ -2.24
CD44-215ENST00000525241 GNA12Q03113 381 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 GNA13Q14344 377 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 TMEM155Q4W5P6 130 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 Q8N402 240 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 GPR32P1Q8NGA4 272 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 RNF133Q8WVZ7 376 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 ARL5BQ96KC2 179 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 KCTD7Q96MP8 289 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 TMEM222Q9H0R3 208 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 C8orf4Q9NR00 106 aa1.03□□□□□ -2.24
CD44-215ENST00000525241 ZNHIT6Q9NWK9 470 aaKnown RBP1.03□□□□□ -2.24
CD44-215ENST00000525241 STRCQ7RTU9 1775 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms