RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 SMIM31A0A1B0GVY4 71 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 J3QRK9 145 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 ACTL6BO94805 426 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 LY86O95711 162 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 PPYP01298 95 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 APOA1P02647 267 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 LSM3P62310 102 aaKnown RBP13.34□□□□□ -0.27
CCNC-213ENST00000523541 MRGPRG-AS1Q2M3A8 158 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 ASPHD1Q5U4P2 390 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 DHRS11Q6UWP2 260 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 MS4A10Q96PG2 267 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 SPIN2AQ99865 258 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 SPIN2BQ9BPZ2 258 aa13.34□□□□□ -0.27
CCNC-213ENST00000523541 RANGRFQ9HD47 186 aaPredicted RBP13.34□□□□□ -0.27
CCNC-213ENST00000523541 C13orf42A0A1B0GVH6 325 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 MSGN1A6NI15 193 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 OVOL1O14753 267 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 RBFOX2O43251 390 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCNC-213ENST00000523541 HRASP01112 189 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 NAT1P18440 290 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 PRSS3P35030 304 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 MAS1LP35410 378 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 TGFBR1P36897 503 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 RPL30P62888 115 aaKnown RBP13.33□□□□□ -0.28
CCNC-213ENST00000523541 OR5T1Q8NG75 326 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 TCTEX1D2Q8WW35 142 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 SNAPC3Q92966 411 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 TINAGL1Q9GZM7 467 aaPredicted RBP13.33□□□□□ -0.28
CCNC-213ENST00000523541 IFT46Q9NQC8 304 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 ANAPC10Q9UM13 185 aa13.33□□□□□ -0.28
CCNC-213ENST00000523541 OR2A4O95047 310 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 SAA1P0DJI8 122 aaPredicted RBP13.32□□□□□ -0.28
CCNC-213ENST00000523541 RORCP51449 518 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 TAS2R46P59540 309 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 TAS2R20P59543 309 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 TNXAQ16473 311 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 SLC25A42Q86VD7 318 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 ANKRD13BQ86YJ7 626 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 CD300LFQ8TDQ1 290 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 SECTM1Q8WVN6 248 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 SRSF12Q8WXF0 261 aaKnown RBP13.32□□□□□ -0.28
CCNC-213ENST00000523541 DCUN1D4Q92564 292 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 OR2A7Q96R45 310 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 PRR25Q96S07 402 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 PHB2Q99623 299 aa13.32□□□□□ -0.28
CCNC-213ENST00000523541 ALX4Q9H161 411 aaPredicted RBP13.32□□□□□ -0.28
CCNC-213ENST00000523541 IGHV3-11P01762 117 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 OR9G9P0C7N8 305 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 ZP3P21754 424 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 VBP1P61758 197 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 CATR1Q13166 79 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 DYRK1AQ13627 763 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 FAM209BQ5JX69 171 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 OR4A5Q8NH83 315 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 TMEM167AQ8TBQ9 72 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 DLX4Q92988 240 aaPredicted RBP13.31□□□□□ -0.28
CCNC-213ENST00000523541 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 ZNF430Q9H8G1 570 aaPredicted RBP13.31□□□□□ -0.28
CCNC-213ENST00000523541 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 CCL28Q9NRJ3 127 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 TAS2R8Q9NYW2 309 aa13.31□□□□□ -0.28
CCNC-213ENST00000523541 IGHV4OR15-8A0A075B7B6 117 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 A0A087WW49 117 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 SAP30O75446 220 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 TPPPO94811 219 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 FGF2P09038 288 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 BRWD1-AS2P59051 145 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 NCS1P62166 190 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 VAX1Q5SQQ9 334 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 MZT2AQ6P582 158 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 PUSL1Q8N0Z8 303 aaKnown RBP13.3□□□□□ -0.28
CCNC-213ENST00000523541 TTC9CQ8N5M4 171 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 ADAD2Q8NCV1 583 aaKnown RBP13.3□□□□□ -0.28
CCNC-213ENST00000523541 AP3S1Q92572 193 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 COMMD3Q9UBI1 195 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 ADAM30Q9UKF2 790 aa13.3□□□□□ -0.28
CCNC-213ENST00000523541 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 SULT1C2O00338 296 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 MPPED1O15442 326 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 KBTBD11O94819 623 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 HPRT1P00492 218 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 PTHLHP12272 177 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 SLURP1P55000 103 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 HERV-K104P61576 105 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 C11orf87Q6NUJ2 197 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 ZNF343Q6P1L6 599 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 ACSM6Q6P461 480 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 IDO2Q6ZQW0 420 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 B9D2Q9BPU9 175 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 ELOVL1Q9BW60 279 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 COA4Q9NYJ1 87 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 BET1LQ9NYM9 111 aa13.29□□□□□ -0.28
CCNC-213ENST00000523541 ZNF256Q9Y2P7 627 aaPredicted RBP13.29□□□□□ -0.28
CCNC-213ENST00000523541 GABARAPO95166 117 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 TAS2R31P59538 309 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 POU2AF1Q16633 256 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 TATDN3Q17R31 274 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 SPAG16Q8N0X2 631 aa13.28□□□□□ -0.28
CCNC-213ENST00000523541 CADM3Q8N126 398 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms