RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 CDK10Q15131 360 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 ZNF343Q6P1L6 599 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 GPHA2Q96T91 129 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
VEGFA-223ENST00000523125 AUNIPQ9H7T9 357 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 RANGRFQ9HD47 186 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-223ENST00000523125 SPATA2Q9UM82 520 aa9.48□□□□□ -0.89
VEGFA-223ENST00000523125 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 OR9G9P0C7N8 305 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 OR6Q1Q8NGQ2 317 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 ACOT12Q8WYK0 555 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 USMG5Q96IX5 58 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 WWC2-AS2Q96NR7 200 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 ASCL2Q99929 193 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 DCUN1D5Q9BTE7 237 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 ADAM30Q9UKF2 790 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 PRELID3BQ9Y3B1 194 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 U3KQK5 164 aa9.47□□□□□ -0.89
VEGFA-223ENST00000523125 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
VEGFA-223ENST00000523125 TRBV9A0A0B4J1U6 114 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 E7EUB6 86 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 TMEM127O75204 238 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 IGLV1-51P01701 117 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 PRH1P02810 166 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 GP9P14770 177 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 ZP3P21754 424 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 FCGR2CP31995 323 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 RPS19P39019 145 aaKnown RBP9.46□□□□□ -0.9
VEGFA-223ENST00000523125 ZNF45Q02386 682 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 MMD2Q8IY49 270 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
VEGFA-223ENST00000523125 TCTEX1D2Q8WW35 142 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 OR4C12Q96R67 309 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 PHB2Q99623 299 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 DIABLOQ9NR28 239 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 CCL28Q9NRJ3 127 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 TAS2R8Q9NYW2 309 aa9.46□□□□□ -0.9
VEGFA-223ENST00000523125 PEF1Q9UBV8 284 aaKnown RBP9.46□□□□□ -0.9
VEGFA-223ENST00000523125 MRPS7Q9Y2R9 242 aaKnown RBP9.46□□□□□ -0.9
VEGFA-223ENST00000523125 A0A1B0GW64 132 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 TRIM64CA6NLI5 447 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 XRCC3O43542 346 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 AIREO43918 545 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 PPYP01298 95 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 FCER2P06734 321 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 ARPC4P59998 168 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 RHOGP84095 191 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 MSMO1Q15800 293 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 ZNF66Q6ZN08 573 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 Q8N1Y9 231 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 TTC9CQ8N5M4 171 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 TSPAN14Q8NG11 270 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 SPIN2AQ99865 258 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 SPIN2BQ9BPZ2 258 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 ELOVL1Q9BW60 279 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 AKIP1Q9NQ31 210 aa9.45□□□□□ -0.9
VEGFA-223ENST00000523125 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 HMX3A6NHT5 357 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 MPPED1O15442 326 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 TNFSF12O43508 249 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 CREBL2O60519 120 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-223ENST00000523125 ACTL6BO94805 426 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 KBTBD11O94819 623 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 OR2A4O95047 310 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-223ENST00000523125 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 TIMM50Q3ZCQ8 353 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
VEGFA-223ENST00000523125 A0A087WXM4 84 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 BMPR1BO00238 502 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 FRMD6-AS1P0C7T7 363 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 ZNF735P0CB33 412 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 CBX5P45973 191 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
VEGFA-223ENST00000523125 UBE2NLQ5JXB2 153 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
VEGFA-223ENST00000523125 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms