RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 L7N2F9 121 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TMEM50AO95807 157 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MOB3BQ86TA1 216 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TCTEX1D1Q8N7M0 179 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RPEQ96AT9 228 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ADTRPQ96IZ2 230 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RHOVQ96L33 236 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 Q96MF0 132 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SPIN2AQ99865 258 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SPIN2BQ9BPZ2 258 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HEXA-AS1Q9H8Q6 139 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TMEM140Q9NV12 185 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CREBBPQ92793 2442 aa12.17□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CSPG4Q6UVK1 2322 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HMSDA8MTL9 139 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RBFOX2O43251 390 aaKnown RBP eCLIP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RBMXL2O75526 392 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SLC25A16P16260 332 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SSX2Q16385 188 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 C1orf122Q6ZSJ8 110 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 POMT1Q9Y6A1 747 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FLNAP21333 2647 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 H3BP45 60 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR2F2O95006 317 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 MSMBP08118 114 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 IAPPP10997 89 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 NQO2P16083 231 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 IL3RAP26951 378 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CNTFRP26992 372 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HTR1DP28221 377 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ID3Q02535 119 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RTL8BQ17RB0 113 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 RUSC1-AS1Q66K80 236 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 BSCL2Q96G97 398 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ARL6Q9H0F7 186 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SLA2Q9H6Q3 261 aa12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 UNKLQ9H9P5 680 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 FAM212BQ9NTI7 297 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 POLR3KQ9Y2Y1 108 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ABCA1O95477 2261 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 A0A1W2PPI3 338 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SHOXO15266 292 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 CHST1O43916 411 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 APOA2P02652 100 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 KIR2DS2P43631 304 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 PAX8Q06710 450 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TPTE2P1Q5T6R2 138 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TMEM65Q6PI78 240 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TMUB2Q71RG4 321 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HARBI1Q96MB7 349 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 HIF1ANQ9NWT6 349 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 SOX21Q9Y651 276 aaPredicted RBP12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 TLN2Q9Y4G6 2542 aa12.15□□□□□ -0.46
CSGALNACT1-211ENST00000522854 WRBO00258 174 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 TIMM23O14925 209 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 AVPP01185 164 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 OPN1MWP04001 364 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 LYL1P12980 280 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 FAM71F2Q6NXP2 309 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 PIP4P2Q8N4L2 257 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 REG4Q9BYZ8 158 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 DPM3Q9P2X0 92 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 CENPVL3A0A0U1RRI6 287 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 GAPDHP04406 335 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 SAA1P0DJI8 122 aaPredicted RBP12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 HKR1P10072 659 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 RAB13P51153 203 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 ERVK-16P61578 105 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 RPS16P62249 146 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 RELBQ01201 579 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 BRD3OSQ6XYD6 125 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 LRRC75A-AS1Q8N1F1 130 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 C11orf1Q9H5F2 150 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 TPSG1Q9NRR2 321 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 WASHC3Q9Y3C0 194 aa12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 AMMECR1Q9Y4X0 333 aaPredicted RBP12.14□□□□□ -0.47
CSGALNACT1-211ENST00000522854 TRAV40A0A0B4J280 105 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 FAM24AA6NFZ4 105 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 LEUTXA8MZ59 168 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 RLN2P04090 185 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 PET100P0DJ07 73 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 SLC25A6P12236 298 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 PAX9P55771 341 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 HNF4GQ14541 408 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 OPCMLQ14982 345 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 ACOT7LQ6ZUV0 252 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 CIARTQ8N365 385 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 INO80EQ8NBZ0 244 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 AJUBAQ96IF1 538 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
CSGALNACT1-211ENST00000522854 B4DSR2 109 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms