RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 CDX1P47902 265 aaPredicted RBP13.88□□□□□ -0.19
CLK4-211ENST00000522556 TAS2R46P59540 309 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 CBX3Q13185 183 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 KPRPQ5T749 579 aaPredicted RBP13.88□□□□□ -0.19
CLK4-211ENST00000522556 ZNF491Q8N8L2 437 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 OSR1Q8TAX0 266 aaPredicted RBP13.88□□□□□ -0.19
CLK4-211ENST00000522556 MOB3AQ96BX8 217 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 MS4A10Q96PG2 267 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 HSD17B10Q99714 261 aaKnown RBP13.88□□□□□ -0.19
CLK4-211ENST00000522556 DCUN1D5Q9BTE7 237 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 SCPEP1Q9HB40 452 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 KLK11Q9UBX7 282 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 ADAM30Q9UKF2 790 aa13.88□□□□□ -0.19
CLK4-211ENST00000522556 M0QYG6 137 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 CCL24O00175 119 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 RGS5O15539 181 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 SLC22A5O76082 557 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 GNRHRP30968 328 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 RAB9AP51151 201 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 HERV-K104P61576 105 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 PRSS8Q16651 343 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 VMA21Q3ZAQ7 101 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 ACTBL2Q562R1 376 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 DHRS11Q6UWP2 260 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 ZNF66Q6ZN08 573 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 OR51H1Q8NH63 302 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 C4orf3Q8WVX3 66 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 ZNF430Q9H8G1 570 aaPredicted RBP13.87□□□□□ -0.19
CLK4-211ENST00000522556 CCDC59Q9P031 241 aaKnown RBP13.87□□□□□ -0.19
CLK4-211ENST00000522556 PRELID3BQ9Y3B1 194 aa13.87□□□□□ -0.19
CLK4-211ENST00000522556 MYOD1P15172 320 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 RCVRNP35243 200 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 RAB25P57735 213 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 DGCR2P98153 550 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 TNXAQ16473 311 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 SSX9Q7RTT3 188 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 TEX45Q8NA69 505 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 OR5T1Q8NG75 326 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 OR4S2Q8NH73 311 aa13.86□□□□□ -0.19
CLK4-211ENST00000522556 SLIRPQ9GZT3 109 aaKnown RBP13.86□□□□□ -0.19
CLK4-211ENST00000522556 I3L521 148 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 RBMXL2O75526 392 aaKnown RBP13.85□□□□□ -0.19
CLK4-211ENST00000522556 CNIH1O95406 144 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 MYCNOSP40205 109 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 MSMO1Q15800 293 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 AKIRIN2Q53H80 203 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 TMEM65Q6PI78 240 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 SPAG16Q8N0X2 631 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 OR4D10Q8NGI6 311 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
CLK4-211ENST00000522556 BCL7BQ9BQE9 202 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 TINAGL1Q9GZM7 467 aaPredicted RBP13.85□□□□□ -0.19
CLK4-211ENST00000522556 RBM38Q9H0Z9 239 aaKnown RBP13.85□□□□□ -0.19
CLK4-211ENST00000522556 SCOCQ9UIL1 159 aa13.85□□□□□ -0.19
CLK4-211ENST00000522556 A0A1B0GW64 132 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 E7EUB6 86 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 IGHV3-11P01762 117 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 RLN1P04808 185 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 AADACL3Q5VUY0 350 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 FOXB2Q5VYV0 432 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 C19orf35Q6ZS72 473 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 PUSL1Q8N0Z8 303 aaKnown RBP13.84□□□□□ -0.19
CLK4-211ENST00000522556 UBE2E2Q96LR5 201 aa13.84□□□□□ -0.19
CLK4-211ENST00000522556 MSGN1A6NI15 193 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 KBTBD11O94819 623 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 S1PR2O95136 353 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 RPA2P15927 270 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 HOXD3P31249 432 aaPredicted RBP13.83□□□□□ -0.2
CLK4-211ENST00000522556 TPPP2P59282 170 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 TMEM267Q0VDI3 215 aaPredicted RBP13.83□□□□□ -0.2
CLK4-211ENST00000522556 FHL3Q13643 280 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 PHLDA2Q53GA4 152 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 PDLIM3Q53GG5 364 aaPredicted RBP13.83□□□□□ -0.2
CLK4-211ENST00000522556 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 ZBTB34Q8NCN2 500 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 OR11H1Q8NG94 326 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 OR5M8Q8NGP6 311 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 RHOVQ96L33 236 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 C6orf62Q9GZU0 229 aaPredicted RBP13.83□□□□□ -0.2
CLK4-211ENST00000522556 MTFP1Q9UDX5 166 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 VSIG4Q9Y279 399 aa13.83□□□□□ -0.2
CLK4-211ENST00000522556 TRAV3A0A0B4J244 114 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 NOL3O60936 208 aaKnown RBP13.82□□□□□ -0.2
CLK4-211ENST00000522556 PGLYRP1O75594 196 aaPredicted RBP13.82□□□□□ -0.2
CLK4-211ENST00000522556 PRH1P02810 166 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 TRGV3P03979 118 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 CD3DP04234 171 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 SLC6A1P30531 599 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 KRTAP10-11P60412 298 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 FAAP20Q6NZ36 180 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 POC5Q8NA72 575 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 OR6F1Q8NGZ6 308 aa13.82□□□□□ -0.2
CLK4-211ENST00000522556 PRKDCP78527 4128 aaKnown RBP13.81□□□□□ -0.2
CLK4-211ENST00000522556 IGHV4OR15-8A0A075B7B6 117 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 A0A087WW49 117 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 HMX3A6NHT5 357 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 KIR2DS2P43631 304 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 TSPAN5P62079 268 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 CATR1Q13166 79 aa13.81□□□□□ -0.2
CLK4-211ENST00000522556 VAX1Q5SQQ9 334 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms