RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SLC25A38Q96DW6 304 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 ADAM30Q9UKF2 790 aa15.86■□□□□ 0.13
SDCBP-209ENST00000522243 TRAV18A0A075B6X5 111 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 PRH1P02810 166 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 FCER2P06734 321 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 OR9G9P0C7N8 305 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 PTHLHP12272 177 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 CD36P16671 472 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 CDK10Q15131 360 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 C10orf55Q5SWW7 151 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 VKORC1L1Q8N0U8 176 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 ADAD2Q8NCV1 583 aaKnown RBP15.85■□□□□ 0.13
SDCBP-209ENST00000522243 PEF1Q9UBV8 284 aaKnown RBP15.85■□□□□ 0.13
SDCBP-209ENST00000522243 SPATA2Q9UM82 520 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 PRELID3BQ9Y3B1 194 aa15.85■□□□□ 0.13
SDCBP-209ENST00000522243 BRI3O95415 125 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 AADACP22760 399 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 SYNJ2BPP57105 145 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 KLF5Q13887 457 aaPredicted RBP15.84■□□□□ 0.13
SDCBP-209ENST00000522243 ZNF343Q6P1L6 599 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 ANKRD13BQ86YJ7 626 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 GVQW1Q8N7I0 195 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 TCTEX1D2Q8WW35 142 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 GPHA2Q96T91 129 aa15.84■□□□□ 0.13
SDCBP-209ENST00000522243 MRPS7Q9Y2R9 242 aaKnown RBP15.84■□□□□ 0.13
SDCBP-209ENST00000522243 TNCP24821 2201 aa15.83■□□□□ 0.13
SDCBP-209ENST00000522243 SLC22A5O76082 557 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 ACTL6BO94805 426 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 IGLV1-51P01701 117 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 FRMD6-AS1P0C7T7 363 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 MMD2Q8IY49 270 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 BEST4Q8NFU0 473 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 USMG5Q96IX5 58 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 TAS2R8Q9NYW2 309 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 ETV7Q9Y603 341 aa15.83■□□□□ 0.12
SDCBP-209ENST00000522243 ARPC4P59998 168 aa15.82■□□□□ 0.12
SDCBP-209ENST00000522243 OR9G4Q8NGQ1 327 aa15.82■□□□□ 0.12
SDCBP-209ENST00000522243 CCL28Q9NRJ3 127 aa15.82■□□□□ 0.12
SDCBP-209ENST00000522243 HMX3A6NHT5 357 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 CREBL2O60519 120 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-209ENST00000522243 FCGR2CP31995 323 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 TGFBR1P36897 503 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 SCAND1P57086 179 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 BRWD1-AS2P59051 145 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 RHOGP84095 191 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 ZNF45Q02386 682 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 EIF4EBP1Q13541 118 aaPredicted RBP15.81■□□□□ 0.12
SDCBP-209ENST00000522243 MFSD4AQ8N468 514 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 OR4S2Q8NH73 311 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 SECTM1Q8WVN6 248 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 HSD17B10Q99714 261 aaKnown RBP15.81■□□□□ 0.12
SDCBP-209ENST00000522243 AKIP1Q9NQ31 210 aa15.81■□□□□ 0.12
SDCBP-209ENST00000522243 TNFSF12O43508 249 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 EXOSC2Q13868 293 aaKnown RBP15.8■□□□□ 0.12
SDCBP-209ENST00000522243 RPEL1Q2QD12 228 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 KCTD21Q4G0X4 260 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 IL34Q6ZMJ4 242 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 HOGA1Q86XE5 327 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 SPIN2AQ99865 258 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 SPIN2BQ9BPZ2 258 aa15.8■□□□□ 0.12
SDCBP-209ENST00000522243 MEIS3P1A6NDR6 274 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 OR2A4O95047 310 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 ATP5G2Q06055 141 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 ZNF66Q6ZN08 573 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 SSX9Q7RTT3 188 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 Q8N1Y9 231 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 TTC9CQ8N5M4 171 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 OR13F1Q8NGS4 319 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 SNAPC3Q92966 411 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 RCHY1Q96PM5 261 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 FYTTD1Q96QD9 318 aaKnown RBP15.79■□□□□ 0.12
SDCBP-209ENST00000522243 OR2A7Q96R45 310 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 AUNIPQ9H7T9 357 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 DIABLOQ9NR28 239 aa15.79■□□□□ 0.12
SDCBP-209ENST00000522243 E7EUB6 86 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 OR2J3O76001 311 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 KBTBD11O94819 623 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 CSN3P07498 182 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 TATDN3Q17R31 274 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 C19orf35Q6ZS72 473 aa15.78■□□□□ 0.12
SDCBP-209ENST00000522243 A0A0A6YYH2 397 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 TRBV9A0A0B4J1U6 114 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 A6NJ64 397 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 FAM223BA6NKX1 122 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 PPYP01298 95 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 IGHV4-30-4P0DP06 118 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 RPL27AP46776 148 aaKnown RBP15.77■□□□□ 0.12
SDCBP-209ENST00000522243 FXYD4P59646 89 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 FAM223AQ8IWN6 122 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 PUSL1Q8N0Z8 303 aaKnown RBP15.77■□□□□ 0.12
SDCBP-209ENST00000522243 VSTM2AQ8TAG5 236 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 TMEM167AQ8TBQ9 72 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 SLC5A7Q9GZV3 580 aa15.77■□□□□ 0.12
SDCBP-209ENST00000522243 TEX22C9J3V5 150 aa15.76■□□□□ 0.11
SDCBP-209ENST00000522243 BMPR1BO00238 502 aa15.76■□□□□ 0.11
SDCBP-209ENST00000522243 IL6RP08887 468 aaPredicted RBP15.76■□□□□ 0.11
SDCBP-209ENST00000522243 MYOD1P15172 320 aa15.76■□□□□ 0.11
SDCBP-209ENST00000522243 LSM3P62310 102 aaKnown RBP15.76■□□□□ 0.11
SDCBP-209ENST00000522243 A0A1B0GW64 132 aa15.75■□□□□ 0.11
SDCBP-209ENST00000522243 DPPA5A6NC42 116 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms