RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 SCGB2B2Q4G0G5 96 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 ZNF57Q68EA5 555 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-210ENST00000521932 GLDNQ6ZMI3 551 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-210ENST00000521932 IDO2Q6ZQW0 420 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 PDPNQ86YL7 162 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 CMTM1Q8IZ96 169 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 OR4C13Q8NGP0 309 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 OR13C8Q8NGS7 320 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 ZFAND1Q8TCF1 268 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 ZNF486Q96H40 463 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-210ENST00000521932 C7orf50Q9BRJ6 194 aaKnown RBP6.65□□□□□ -1.34
VPS13B-210ENST00000521932 RAB18Q9NP72 206 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 TNFRSF19Q9NS68 423 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 GPR132Q9UNW8 380 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 WASHC3Q9Y3C0 194 aa6.65□□□□□ -1.34
VPS13B-210ENST00000521932 CENPXA8MT69 81 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 M0QZK8 103 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 FGF16O43320 207 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 CHST1O43916 411 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 UPK1BO75841 260 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 IGKV1-16P04430 117 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 AMY1AP04745 511 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 CTSDP07339 412 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-210ENST00000521932 TMEM11P17152 192 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 LGALS7P47929 136 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 INPP1P49441 399 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 F2RL1P55085 397 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 RND3P61587 244 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 HES1Q14469 280 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 HNF4GQ14541 408 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 PRR31Q5SQ13 230 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 C11orf88Q6PI97 169 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 KCTD9Q7L273 389 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 TMEM219Q86XT9 240 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 TCTEX1D1Q8N7M0 179 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 NPBQ8NG41 125 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 MARCH1Q8TCQ1 289 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 FLYWCH2Q96CP2 140 aaKnown RBP6.64□□□□□ -1.35
VPS13B-210ENST00000521932 RITA1Q96K30 269 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 SLC25A21Q9BQT8 299 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-210ENST00000521932 RTBDNQ9BSG5 229 aaPredicted RBP6.64□□□□□ -1.35
VPS13B-210ENST00000521932 SLC25A33Q9BSK2 321 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 SLC35D1Q9NTN3 355 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 MCUBQ9NWR8 336 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 PRELID3BQ9Y3B1 194 aa6.64□□□□□ -1.35
VPS13B-210ENST00000521932 H7C2Y5 167 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 MPPED1O15442 326 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 RBFOX2O43251 390 aaKnown RBP eCLIP6.63□□□□□ -1.352e-9■■■■■ 37.6
VPS13B-210ENST00000521932 TNFSF12O43508 249 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 TSPAN9O75954 239 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 NDUFA3O95167 84 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 APOA2P02652 100 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 F2RP25116 425 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 S100GP29377 79 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 KIR2DS2P43631 304 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 IFITM3Q01628 133 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 CATR1Q13166 79 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 RTL8BQ17RB0 113 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 DHRS7BQ6IAN0 325 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-210ENST00000521932 Q8N2B8 174 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 FAM71E2Q8N5Q1 922 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 C5orf56Q8N8D9 126 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 Q8N9W7 124 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 OSR1Q8TAX0 266 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-210ENST00000521932 CD300LFQ8TDQ1 290 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 RBMXL1Q96E39 390 aaKnown RBP6.63□□□□□ -1.35
VPS13B-210ENST00000521932 SCGB3A2Q96PL1 93 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 GPHA2Q96T91 129 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 C5orf66Q9H5L9 145 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 SLC2A9Q9NRM0 540 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 FAM212BQ9NTI7 297 aaPredicted RBP6.63□□□□□ -1.35
VPS13B-210ENST00000521932 C1RLQ9NZP8 487 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 MOB4Q9Y3A3 225 aa6.63□□□□□ -1.35
VPS13B-210ENST00000521932 SETD2Q9BYW2 2564 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-210ENST00000521932 TMEM89A2RUT3 159 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 NCBP2LA6PVI3 153 aaKnown RBP6.62□□□□□ -1.35
VPS13B-210ENST00000521932 SRRM4A7MD48 611 aaKnown RBP6.62□□□□□ -1.35
VPS13B-210ENST00000521932 RNF212BA8MTL3 300 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 NBR2O15453 112 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 LYRM1O43325 122 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 FCGR3BO75015 233 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 B3GALNT1O75752 331 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 NDUFA7O95182 113 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 HPRT1P00492 218 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 IGLV2-23P01705 113 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 RLN1P04808 185 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 CRYBA1P05813 215 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 CRYGBP07316 175 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 HKR1P10072 659 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 PGAM2P15259 253 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 CNTFRP26992 372 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 BTCP35070 178 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 PIGPP57054 158 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 RPS16P62249 146 aaKnown RBP6.62□□□□□ -1.35
VPS13B-210ENST00000521932 BLCAPP62952 87 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 CBX3Q13185 183 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 RBMS2Q15434 407 aaKnown RBP6.62□□□□□ -1.35
VPS13B-210ENST00000521932 MMDQ15546 238 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 KRTAP21-3Q3LHN1 58 aa6.62□□□□□ -1.35
VPS13B-210ENST00000521932 ABCA11PQ4W5N1 156 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms