RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 EDA2RQ9HAV5 297 aa14.94□□□□□ -0.02
PABPC1-215ENST00000520804 AKIP1Q9NQ31 210 aa14.94□□□□□ -0.02
PABPC1-215ENST00000520804 OR2W1Q9Y3N9 320 aa14.94□□□□□ -0.02
PABPC1-215ENST00000520804 TRBV9A0A0B4J1U6 114 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 SMIM30A4D0T7 59 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 FCGR3BO75015 233 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 ACTL6BO94805 426 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 HLA-DQB1P01920 261 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 PRH1P02810 166 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 CTXN2P0C2S0 81 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 ZNF45Q02386 682 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 HACD4Q5VWC8 232 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 KCTD9Q7L273 389 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 GTSCR1Q86UQ5 136 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 MMD2Q8IY49 270 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 SPIN2AQ99865 258 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 SPIN2BQ9BPZ2 258 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 DCUN1D5Q9BTE7 237 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 PEMTQ9UBM1 199 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 TNCP24821 2201 aa14.93□□□□□ -0.02
PABPC1-215ENST00000520804 IZUMO1RA6ND01 250 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 NOTOA8MTQ0 251 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 BMPR1BO00238 502 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 IGLV2-14P01704 120 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 NFYAP23511 347 aaPredicted RBP14.92□□□□□ -0.02
PABPC1-215ENST00000520804 MECP2P51608 486 aaKnown RBP14.92□□□□□ -0.02
PABPC1-215ENST00000520804 GABARAPL2P60520 117 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 RPL30P62888 115 aaKnown RBP14.92□□□□□ -0.02
PABPC1-215ENST00000520804 ATP5G2Q06055 141 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 EXOSC2Q13868 293 aaKnown RBP14.92□□□□□ -0.02
PABPC1-215ENST00000520804 TTC9CQ8N5M4 171 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 SPATA25Q9BR10 227 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 DCSTAMPQ9H295 470 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 RAB26Q9ULW5 256 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 RBMX2Q9Y388 322 aaKnown RBP14.92□□□□□ -0.02
PABPC1-215ENST00000520804 PRELID3BQ9Y3B1 194 aa14.92□□□□□ -0.02
PABPC1-215ENST00000520804 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 MRPS14O60783 128 aaKnown RBP14.91□□□□□ -0.02
PABPC1-215ENST00000520804 SLC22A5O76082 557 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 CD36P16671 472 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 FGF9P31371 208 aaPredicted RBP14.91□□□□□ -0.02
PABPC1-215ENST00000520804 HAGHQ16775 308 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 OR2B11Q5JQS5 317 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 C10orf55Q5SWW7 151 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 UBE2UQ5VVX9 321 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 OR2K2Q8NGT1 345 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 NUDCD2Q8WVJ2 157 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 ISOC1Q96CN7 298 aa14.91□□□□□ -0.02
PABPC1-215ENST00000520804 TXNL4BQ9NX01 149 aaKnown RBP14.91□□□□□ -0.02
PABPC1-215ENST00000520804 MRPS7Q9Y2R9 242 aaKnown RBP14.91□□□□□ -0.02
PABPC1-215ENST00000520804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.9□□□□□ -0.02
PABPC1-215ENST00000520804 IGKV1D-13A0A0B4J2D9 117 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 AIREO43918 545 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 TUSC2O75896 110 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 IGKV1-13P0DP09 117 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 ZFAND6Q6FIF0 208 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 CNIH2Q6PI25 160 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 NECAP1Q8NC96 275 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 OR51E2Q9H255 320 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 TUBA4BQ9H853 241 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 TENM2Q9NT68 2774 aa14.9□□□□□ -0.02
PABPC1-215ENST00000520804 TMEM235A6NFC5 223 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 SCGNO76038 276 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 EIF4EBP1Q13541 118 aaPredicted RBP14.89□□□□□ -0.03
PABPC1-215ENST00000520804 ADAMTSL5Q6ZMM2 481 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 SLC25A42Q86VD7 318 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 VKORC1L1Q8N0U8 176 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 HSD17B10Q99714 261 aaKnown RBP14.89□□□□□ -0.03
PABPC1-215ENST00000520804 DAPK2Q9UIK4 370 aa14.89□□□□□ -0.03
PABPC1-215ENST00000520804 LCE6AA0A183 80 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 TEX22C9J3V5 150 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 SSX5O60225 188 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 OR2J3O76001 311 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 PSMB9P28065 219 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 GNG2P59768 71 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 C15orf32Q32M92 178 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 FAM209BQ5JX69 171 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 TPRA1Q86W33 373 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 SPARTQ8N0X7 666 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 OR4S2Q8NH73 311 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 VSTM2AQ8TAG5 236 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 OR2A7Q96R45 310 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 ANXA10Q9UJ72 324 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 ZNF257Q9Y2Q1 563 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 CSMD3Q7Z407 3707 aa14.88□□□□□ -0.03
PABPC1-215ENST00000520804 HMX3A6NHT5 357 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 KBTBD11O94819 623 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 CD300EQ496F6 205 aaPredicted RBP14.87□□□□□ -0.03
PABPC1-215ENST00000520804 LAX1Q8IWV1 398 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 PUSL1Q8N0Z8 303 aaKnown RBP14.87□□□□□ -0.03
PABPC1-215ENST00000520804 TMEM167AQ8TBQ9 72 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 LGALS14Q8TCE9 139 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 TCTEX1D2Q8WW35 142 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 KCTD12Q96CX2 325 aaKnown RBP14.87□□□□□ -0.03
PABPC1-215ENST00000520804 GAR1Q9NY12 217 aaKnown RBP14.87□□□□□ -0.03
PABPC1-215ENST00000520804 SPATA2Q9UM82 520 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 RRP15Q9Y3B9 282 aaKnown RBP14.87□□□□□ -0.03
PABPC1-215ENST00000520804 DMRT1Q9Y5R6 373 aa14.87□□□□□ -0.03
PABPC1-215ENST00000520804 LYSTQ99698 3801 aa14.86□□□□□ -0.03
PABPC1-215ENST00000520804 IFNA6P05013 189 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms