RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 TRPT1Q86TN4 253 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 Q8IYB0 196 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 H1FOOQ8IZA3 346 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 INTS1Q8N201 2190 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 CCDC71LQ8N9Z2 235 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 OR8G5Q8NG78 346 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 OR5T2Q8NGG2 359 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 FAM57AQ8TBR7 257 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 NEK7Q8TDX7 302 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 GLYATL2Q8WU03 294 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 S100PBPQ96BU1 408 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 ZNF471Q9BX82 626 aaPredicted RBP3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 SUCNR1Q9BXA5 334 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 PARP12Q9H0J9 701 aaKnown RBP3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 CXXC4Q9H2H0 198 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 C11orf1Q9H5F2 150 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 RHOFQ9HBH0 211 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 ZFP57Q9NU63 452 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 SDHAF2Q9NX18 166 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 OR1A1Q9P1Q5 309 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 TP53TG5Q9Y2B4 290 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 POLDIP2Q9Y2S7 368 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 SVILO95425 2214 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 LAMA5O15230 3695 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 ARID1AO14497 2285 aa3.91□□□□□ -1.78
CTNNA1-212ENST00000518919 IGF2RP11717 2491 aa3.9□□□□□ -1.78
CTNNA1-212ENST00000518919 ACACAQ13085 2346 aa3.9□□□□□ -1.78
CTNNA1-212ENST00000518919 PTPRQQ9UMZ3 2332 aa3.9□□□□□ -1.78
CTNNA1-212ENST00000518919 TLN1Q9Y490 2541 aaKnown RBP3.9□□□□□ -1.78
CTNNA1-212ENST00000518919 ZSCAN5BA6NJL1 495 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 H0Y980 276 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 I3L521 148 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 K7EPK0 472 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 GPR31O00270 319 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 HSD17B6O14756 317 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TIMM8AO60220 97 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 DEDDO75618 318 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 NXPH2O95156 264 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 HAND1O96004 215 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 CTXN2P0C2S0 81 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 PET100P0DJ07 73 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 RCC1P18754 421 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 ZP3P21754 424 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 PRDX2P32119 198 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TIMP3P35625 211 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 MDH2P40926 338 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 ZNF83P51522 516 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 RAB14P61106 215 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 PRR30Q53SZ7 412 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 SPRNQ5BIV9 151 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 SPIN3Q5JUX0 258 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 FAM159AQ6UWV7 190 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 WDR82Q6UXN9 313 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 LRP11Q86VZ4 500 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 LGI3Q8N145 548 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 CIARTQ8N365 385 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 FAM71E2Q8N5Q1 922 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 SLC35G3Q8N808 338 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 INO80EQ8NBZ0 244 aaPredicted RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 OR52M1Q8NGK5 317 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 OR4D5Q8NGN0 318 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 OR4A4PQ8NGN8 299 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 UBALD1Q8TB05 177 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 RBPMSQ93062 196 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 PHYHIPLQ96FC7 376 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 COQ2Q96H96 371 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 LURAP1Q96LR2 239 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 LINC00052Q96N35 136 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TXN2Q99757 166 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TPPP3Q9BW30 176 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 SFXN3Q9BWM7 321 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 BCL2L14Q9BZR8 327 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM222Q9H0R3 208 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 HIPK2Q9H2X6 1198 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 METTL8Q9H825 291 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 YAE1D1Q9NRH1 226 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 CCL28Q9NRJ3 127 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM100Q9NV29 134 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 TREM2Q9NZC2 230 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 GSKIPQ9P0R6 139 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 RCL1Q9Y2P8 373 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 MEMO1Q9Y316 297 aa3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 MAP1BP46821 2468 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 DSPP15924 2871 aaKnown RBP3.9□□□□□ -1.79
CTNNA1-212ENST00000518919 RP1L1Q8IWN7 2480 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 CADP27708 2225 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 DMXL2Q8TDJ6 3036 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 A0A0G2JRQ6 117 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 C3orf85A0A1B0GTC6 90 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 TMEM30CPA0ZSE6 113 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 NKX2-6A6NCS4 301 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 NKX6-3A6NJ46 265 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 SRRM4A7MD48 611 aaKnown RBP3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 A8MXK9 166 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 C12orf77C9JDV5 145 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 ATP6V1G2-DDX39BF2Z307 99 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 MKRN2OSH3BPM6 223 aa3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.89□□□□□ -1.79
CTNNA1-212ENST00000518919 M0R1B8 84 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms