RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 CDK10Q15131 360 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 OR2B11Q5JQS5 317 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 ZNF343Q6P1L6 599 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 HOGA1Q86XE5 327 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 BEST4Q8NFU0 473 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 GPHA2Q96T91 129 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 HSD17B10Q99714 261 aaKnown RBP9.48□□□□□ -0.89
VEGFA-218ENST00000518689 AUNIPQ9H7T9 357 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 RANGRFQ9HD47 186 aaPredicted RBP9.48□□□□□ -0.89
VEGFA-218ENST00000518689 SPATA2Q9UM82 520 aa9.48□□□□□ -0.89
VEGFA-218ENST00000518689 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 TRBV12-3P01733 135 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 OR9G9P0C7N8 305 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 C10orf55Q5SWW7 151 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 IL34Q6ZMJ4 242 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 VKORC1L1Q8N0U8 176 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 MFSD4AQ8N468 514 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 OR6Q1Q8NGQ2 317 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 ACOT12Q8WYK0 555 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 YIPF6Q96EC8 236 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 USMG5Q96IX5 58 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 WWC2-AS2Q96NR7 200 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 ASCL2Q99929 193 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 DCUN1D5Q9BTE7 237 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 COA4Q9NYJ1 87 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 ADAM30Q9UKF2 790 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 PRELID3BQ9Y3B1 194 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 SMAD5-AS1Q9Y6J3 95 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 U3KQK5 164 aa9.47□□□□□ -0.89
VEGFA-218ENST00000518689 HUWE1Q7Z6Z7 4374 aaKnown RBP9.47□□□□□ -0.89
VEGFA-218ENST00000518689 TRBV9A0A0B4J1U6 114 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 E7EUB6 86 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 TMEM127O75204 238 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 IGLV1-51P01701 117 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 PRH1P02810 166 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 GP9P14770 177 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 ZP3P21754 424 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 FCGR2CP31995 323 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 RPS19P39019 145 aaKnown RBP9.46□□□□□ -0.9
VEGFA-218ENST00000518689 ZNF45Q02386 682 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 HAPLN4Q86UW8 402 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 MMD2Q8IY49 270 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 PUSL1Q8N0Z8 303 aaKnown RBP9.46□□□□□ -0.9
VEGFA-218ENST00000518689 TCTEX1D2Q8WW35 142 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 OR4C12Q96R67 309 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 PHB2Q99623 299 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 DIABLOQ9NR28 239 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 CCL28Q9NRJ3 127 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 TAS2R8Q9NYW2 309 aa9.46□□□□□ -0.9
VEGFA-218ENST00000518689 PEF1Q9UBV8 284 aaKnown RBP9.46□□□□□ -0.9
VEGFA-218ENST00000518689 MRPS7Q9Y2R9 242 aaKnown RBP9.46□□□□□ -0.9
VEGFA-218ENST00000518689 A0A1B0GW64 132 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 TRIM64CA6NLI5 447 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 XRCC3O43542 346 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 AIREO43918 545 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 PPYP01298 95 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 FCER2P06734 321 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 ARPC4P59998 168 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 RHOGP84095 191 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 MSMO1Q15800 293 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 ZNF66Q6ZN08 573 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 SBSPONQ8IVN8 264 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 Q8N1Y9 231 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 TTC9CQ8N5M4 171 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 TSPAN14Q8NG11 270 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 OR13F1Q8NGS4 319 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 SECTM1Q8WVN6 248 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 SPIN2AQ99865 258 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 SPIN2BQ9BPZ2 258 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 ELOVL1Q9BW60 279 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 AKIP1Q9NQ31 210 aa9.45□□□□□ -0.9
VEGFA-218ENST00000518689 MEIS3P1A6NDR6 274 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 HMX3A6NHT5 357 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 MPPED1O15442 326 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 TNFSF12O43508 249 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 CREBL2O60519 120 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-218ENST00000518689 ACTL6BO94805 426 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 KBTBD11O94819 623 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 OR2A4O95047 310 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 IL6RP08887 468 aaPredicted RBP9.44□□□□□ -0.9
VEGFA-218ENST00000518689 SYNJ2BPP57105 145 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 TIMM50Q3ZCQ8 353 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 CROCCP3Q8IVE0 287 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 OR5AP2Q8NGF4 316 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 OR9G4Q8NGQ1 327 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 OR2A7Q96R45 310 aa9.44□□□□□ -0.9
VEGFA-218ENST00000518689 A0A087WXM4 84 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 FAM223BA6NKX1 122 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 BMPR1BO00238 502 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 FRMD6-AS1P0C7T7 363 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 ZNF735P0CB33 412 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 CBX5P45973 191 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 LSM3P62310 102 aaKnown RBP9.43□□□□□ -0.9
VEGFA-218ENST00000518689 UBE2NLQ5JXB2 153 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
VEGFA-218ENST00000518689 ANKRD13BQ86YJ7 626 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms