RNA–Protein interactions for RNA: ENST00000518537.5

PCM1-206, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-206ENST00000518537 THNSL2Q86YJ6 484 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 OR52E5Q8NH55 327 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 NEIL1Q96FI4 390 aaPredicted RBP13.56□□□□□ -0.24
PCM1-206ENST00000518537 MRPL20Q9BYC9 149 aaKnown RBP13.56□□□□□ -0.24
PCM1-206ENST00000518537 UBTD1Q9HAC8 227 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 ADGRG4Q8IZF6 3080 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 A0A1W2PPH5 198 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 LY86O95711 162 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 TSPAN15O95858 294 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 APOA2P02652 100 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 FHITP49789 147 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 OR4A47Q6IF82 309 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 OR13D1Q8NGV5 346 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 OR9G1Q8NH87 305 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 ZNF596Q8TC21 504 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 TREM1Q9NP99 234 aa13.56□□□□□ -0.24
PCM1-206ENST00000518537 NBASA2RRP1 2371 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 A0A1W2PPR1 153 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 AKR1C1Q04828 323 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 ABHD12Q8N2K0 398 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 TMEM186Q96B77 213 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 TMEM133Q9H2Q1 129 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 A0A087X0M5 115 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 A0A1B0GX30 115 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 AGPAT2O15120 278 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 POU2AF1Q16633 256 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 AKR1C8PQ5T2L2 129 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 FAM71F2Q6NXP2 309 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 LYPD6BQ8NI32 183 aa13.55□□□□□ -0.24
PCM1-206ENST00000518537 PPIAL4CA0A0B4J2A2 164 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 C15orf61A6NNL5 157 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 PPIAL4GP0DN37 164 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 REG1BP48304 166 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 RPP30P78346 268 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 TAGLNQ01995 201 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 WDR25Q64LD2 544 aaPredicted RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 ZNF429Q86V71 674 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 C11orf42Q8N5U0 333 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 OR10P1Q8NGE3 313 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 AIFM2Q9BRQ8 373 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 HIPK2Q9H2X6 1198 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 KALRNO60229 2985 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 H7C2Y5 167 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 IL3RAP26951 378 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 RPS16P62249 146 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 PINX1Q96BK5 328 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 RBMXL1Q96E39 390 aaKnown RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 PARD6GQ9BYG4 376 aaPredicted RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 TMEM231Q9H6L2 316 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 CHODLQ9H9P2 273 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 HEYLQ9NQ87 328 aaPredicted RBP13.54□□□□□ -0.24
PCM1-206ENST00000518537 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
PCM1-206ENST00000518537 UBE2L5PA0A1B0GUS4 154 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 TMEM218A2RU14 115 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 PMS2P5A8MQ11 134 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 SCO1O75880 301 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 IGKV1-16P04430 117 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 CDKN1AP38936 164 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
PCM1-206ENST00000518537 RSG1Q9BU20 258 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 TMEM147Q9BVK8 224 aa13.53□□□□□ -0.24
PCM1-206ENST00000518537 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
PCM1-206ENST00000518537 H0YJW9 148 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 SCAF4O95104 1147 aaKnown RBP13.52□□□□□ -0.24
PCM1-206ENST00000518537 APOC3P02656 99 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 OR8U8P0C7N1 319 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 HOXA1P49639 335 aaPredicted RBP13.52□□□□□ -0.24
PCM1-206ENST00000518537 COMMD1Q8N668 190 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 C8orf46Q8TAG6 207 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 NABP2Q9BQ15 211 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 WDR61Q9GZS3 305 aaKnown RBP13.52□□□□□ -0.24
PCM1-206ENST00000518537 FAM96BQ9Y3D0 163 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 HIVEP3Q5T1R4 2406 aa13.52□□□□□ -0.24
PCM1-206ENST00000518537 PKD1L2Q7Z442 2459 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 NBEAQ8NFP9 2946 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 C15orf62A8K5M9 175 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 IFNA10P01566 189 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 GNB2P62879 340 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 OR5AN1Q8NGI8 311 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 OSR1Q8TAX0 266 aaPredicted RBP13.52□□□□□ -0.25
PCM1-206ENST00000518537 PSMG3Q9BT73 122 aaPredicted RBP13.52□□□□□ -0.25
PCM1-206ENST00000518537 NARFLQ9H6Q4 476 aa13.52□□□□□ -0.25
PCM1-206ENST00000518537 A6NNC1 897 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 RNASEK-C17orf49H0YIS7 233 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 UPK2O00526 184 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 ARG1P05089 322 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 SNCAP37840 140 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 VDAC2P45880 294 aaPredicted RBP13.51□□□□□ -0.25
PCM1-206ENST00000518537 PRRX1P54821 245 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
PCM1-206ENST00000518537 DIAPH2-AS1Q14236 149 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 TGIF2LXQ8IUE1 241 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCM1-206ENST00000518537 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
PCM1-206ENST00000518537 ST6GALNAC6Q969X2 333 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms