RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 NUDCD2Q8WVJ2 157 aa13.15□□□□□ -0.3
CTNNA1-206ENST00000517980 SNAPC3Q92966 411 aa13.15□□□□□ -0.3
CTNNA1-206ENST00000517980 GPHA2Q96T91 129 aa13.15□□□□□ -0.3
CTNNA1-206ENST00000517980 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
CTNNA1-206ENST00000517980 BLOC1S6Q9UL45 172 aa13.15□□□□□ -0.3
CTNNA1-206ENST00000517980 SACSQ9NZJ4 4579 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 IGKV1D-13A0A0B4J2D9 117 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 TMEM235A6NFC5 223 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 A8MZ25 164 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 BMPR1BO00238 502 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 ACTL6BO94805 426 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 IGKV1-13P0DP09 117 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 DTYMKP23919 212 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 HACD4Q5VWC8 232 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 C19orf35Q6ZS72 473 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 TXNL4BQ9NX01 149 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
CTNNA1-206ENST00000517980 E7EUB6 86 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 OR2J3O76001 311 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 IGLV2-14P01704 120 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 HLA-DQB1P01920 261 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 PSMB9P28065 219 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 HSPA13P48723 471 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 EXOSC2Q13868 293 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 CDK10Q15131 360 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 ADAMTSL5Q6ZMM2 481 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 THAP7Q9BT49 309 aaPredicted RBP13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 DAPK2Q9UIK4 370 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 SPATA2Q9UM82 520 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 RBMX2Q9Y388 322 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
CTNNA1-206ENST00000517980 RYR2Q92736 4967 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 TRBV9A0A0B4J1U6 114 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 NOTOA8MTQ0 251 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 PPP5D1E7EU14 171 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 SSX5O60225 188 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 HLA-AP01891 365 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 PTHLHP12272 177 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 EDN2P20800 178 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 KCTD9Q7L273 389 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 MMD2Q8IY49 270 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 OR51E2Q9H255 320 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 EDA2RQ9HAV5 297 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 PRELID3BQ9Y3B1 194 aa13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 RRP15Q9Y3B9 282 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-206ENST00000517980 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 FCER2P06734 321 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 IL6RP08887 468 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 CLEC2LP0C7M8 214 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 GALP22466 123 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 BRWD1-AS2P59051 145 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 GNG2P59768 71 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 ARL6IP1Q15041 203 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 UBE2UQ5VVX9 321 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 LCN12Q6JVE5 192 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 CNIH2Q6PI25 160 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 GTSCR1Q86UQ5 136 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 Q8N402 240 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 TCTEX1D2Q8WW35 142 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 FYTTD1Q96QD9 318 aaKnown RBP13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 SPIN2AQ99865 258 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 SPIN2BQ9BPZ2 258 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 DCSTAMPQ9H295 470 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 RNF167Q9H6Y7 350 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 SIGLEC8Q9NYZ4 499 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 RAB26Q9ULW5 256 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 S4R3C0 116 aa13.11□□□□□ -0.31
CTNNA1-206ENST00000517980 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 FAM223BA6NKX1 122 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 ZNF785A8K8V0 405 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 OR2A4O95047 310 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 OR2C1O95371 312 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 MYOD1P15172 320 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 MXD1Q05195 221 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 C15orf32Q32M92 178 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 CD300EQ496F6 205 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 SSX9Q7RTT3 188 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 FAM223AQ8IWN6 122 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 MFSD4AQ8N468 514 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 PLEKHA3Q9HB20 300 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 RETNQ9HD89 108 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 TAS2R8Q9NYW2 309 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 DMRT1Q9Y5R6 373 aa13.1□□□□□ -0.31
CTNNA1-206ENST00000517980 A0A1B0GW64 132 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 TEX22C9J3V5 150 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 CD36P16671 472 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 SDC2P34741 201 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 GABARAPL2P60520 117 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 EIF4EBP1Q13541 118 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 GVQW1Q8N7I0 195 aa13.09□□□□□ -0.31
CTNNA1-206ENST00000517980 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms