RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 NMES1Q9C002 83 aa8.53□□□□□ -1.04
PABPC1-203ENST00000517921 WASHC3Q9Y3C0 194 aa8.53□□□□□ -1.04
PABPC1-203ENST00000517921 IGHV3OR16-10A0A075B7F0 116 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 MARCH11A6NNE9 402 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 H7C2Y5 167 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 TIMM23O14925 209 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 KRASP01116 189 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 EPHA1P21709 976 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 PAX6P26367 422 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 IL15RAQ13261 267 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 HABP2Q14520 560 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 SSX2Q16385 188 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 POU2AF1Q16633 256 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 IZUMO4Q1ZYL8 232 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 IAH1Q2TAA2 248 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 TMEM177Q53S58 311 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 KLF17Q5JT82 389 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 GPR157Q5UAW9 335 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 CYB5R2Q6BCY4 276 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 MOB3BQ86TA1 216 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 RNASE11Q8TAA1 199 aaKnown RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 CFHR4Q92496 578 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 SPIN2AQ99865 258 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 SPIN2BQ9BPZ2 258 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 RANBP3Q9H6Z4 567 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-203ENST00000517921 HILPDAQ9Y5L2 63 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 MMP24Q9Y5R2 645 aa8.52□□□□□ -1.05
PABPC1-203ENST00000517921 TRAV14DV4A0A0A6YYC5 116 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 SRRM4A7MD48 611 aaKnown RBP8.51□□□□□ -1.05
PABPC1-203ENST00000517921 ATG12O94817 140 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 C1QBP02746 253 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 SLC25A6P12236 298 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 NQO2P16083 231 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 MC5RP33032 325 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 ERVK-16P61578 105 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 KRTAP1-1Q07627 177 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 SMCO1Q147U7 214 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 Q5BKY6 102 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 THOC7Q6I9Y2 204 aaKnown RBP8.51□□□□□ -1.05
PABPC1-203ENST00000517921 CCDC144NLQ6NUI1 221 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 BRD3OSQ6XYD6 125 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 Q6ZRM9 215 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 FAM219AQ8IW50 185 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 VKORC1L1Q8N0U8 176 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 DMBX1Q8NFW5 382 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 OR4D5Q8NGN0 318 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 OR4C13Q8NGP0 309 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 OSR1Q8TAX0 266 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-203ENST00000517921 PPP1R1CQ8WVI7 109 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 PPP1R14BQ96C90 147 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 MALSU1Q96EH3 234 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 HARBI1Q96MB7 349 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 CACNG5Q9UF02 275 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 ANK3Q12955 4377 aaKnown RBP8.51□□□□□ -1.05
PABPC1-203ENST00000517921 ZFHX3Q15911 3703 aa8.51□□□□□ -1.05
PABPC1-203ENST00000517921 A0A1B0GU03 582 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 SHOXO15266 292 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 PITX3O75364 302 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 VENTXO95231 258 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 HRASP01112 189 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 FSHBP01225 129 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 OR9G9P0C7N8 305 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 CD1BP29016 333 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 CYCSP99999 105 aaKnown RBP8.5□□□□□ -1.05
PABPC1-203ENST00000517921 LRRC37A5PQ49AS3 106 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 SSX9Q7RTT3 188 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 H2BFWTQ7Z2G1 175 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 FLYWCH2Q96CP2 140 aaKnown RBP8.5□□□□□ -1.05
PABPC1-203ENST00000517921 RHOVQ96L33 236 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 MS4A7Q9GZW8 240 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-203ENST00000517921 TMEM140Q9NV12 185 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 GSKIPQ9P0R6 139 aa8.5□□□□□ -1.05
PABPC1-203ENST00000517921 FAM90A9PA6NNJ1 464 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 K7EPK0 472 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 MPC2O95563 127 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 LY6G6DO95868 133 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 IGLV2-23P01705 113 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 HNRNPCP07910 306 aaKnown RBP eCLIP8.49□□□□□ -1.05
PABPC1-203ENST00000517921 IL6RP08887 468 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-203ENST00000517921 SAA1P0DJI8 122 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-203ENST00000517921 RPS16P62249 146 aaKnown RBP8.49□□□□□ -1.05
PABPC1-203ENST00000517921 RAB32Q13637 225 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 ZFP69Q49AA0 526 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 FBLN7Q53RD9 439 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 OR4A47Q6IF82 309 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 PUSL1Q8N0Z8 303 aaKnown RBP8.49□□□□□ -1.05
PABPC1-203ENST00000517921 FAM71E2Q8N5Q1 922 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 OR11H4Q8NGC9 324 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 RITA1Q96K30 269 aa8.49□□□□□ -1.05
PABPC1-203ENST00000517921 NIPBLQ6KC79 2804 aaeCLIP8.49□□□□□ -1.051e-13■□□□□ 9.7
PABPC1-203ENST00000517921 NF1P21359 2839 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 TRAV3A0A0B4J244 114 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 A0A0U1RQK1 487 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 H0YIZ8 118 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 IGKV1D-33P01593 117 aa8.48□□□□□ -1.05
PABPC1-203ENST00000517921 IGKV1-33P01594 117 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms