RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 Q6ZR03 302 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 LYG1Q8N1E2 194 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 EXOC3-AS1Q8N2X6 119 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 SLC22A24Q8N4F4 322 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 C12orf45Q8N5I9 185 aaPredicted RBP3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 FER1L6-AS1Q8NA97 138 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 RNASE6Q93091 150 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 IGF2BP2-AS1Q96M15 143 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 TRIB3Q96RU7 358 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 KLF6Q99612 283 aaPredicted RBP3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 PARVBQ9HBI1 364 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 GPR84Q9NQS5 396 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 PRR34Q9NV39 138 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 CELA1Q9UNI1 258 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 CEP170Q5SW79 1584 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 TARBP1Q13395 1621 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 AHDC1Q5TGY3 1603 aaPredicted RBP3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 CLIP1P30622 1438 aa3.7□□□□□ -1.82
CTNNA1-202ENST00000517533 YLPM1P49750 1951 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 RTL1A6NKG5 1358 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 IGHV3OR15-7A0A075B7D8 119 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 TMX2-CTNND1H3BSU7 103 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 PIRO00625 290 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 KPNA4O00629 521 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 PIAS1O75925 651 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 C8GP07360 202 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 ZNF19P17023 458 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 S100A7P31151 101 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 GNA12Q03113 381 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 GRK1Q15835 563 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 CCDC153Q494R4 210 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 SAMD13Q5VXD3 122 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 FAM104BQ5XKR9 115 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 GPHB5Q86YW7 130 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 AMN1Q8IY45 258 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 FAM24BQ8N5W8 94 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 RTN4IP1Q8WWV3 396 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 GPR146Q96CH1 333 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 DNAJC30Q96LL9 226 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 NMNAT3Q96T66 252 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 RSPO3Q9BXY4 272 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 C11orf68Q9H3H3 251 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 LINC00574Q9H8X3 128 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 LHX9Q9NQ69 397 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 ACER3Q9NUN7 267 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 SSR3Q9UNL2 185 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 PHLDA3Q9Y5J5 127 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 KIF25-AS1Q9Y6Z4 181 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 LOXHD1Q8IVV2 1947 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 WDR97A6NE52 1622 aa3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 YTHDC2Q9H6S0 1430 aaKnown RBP3.69□□□□□ -1.82
CTNNA1-202ENST00000517533 CUL7Q14999 1698 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 THOC2Q8NI27 1593 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 SIGLEC16A6NMB1 481 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 CLDN25C9JDP6 229 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 H7C1C5 153 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 PANO1I0J062 215 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 GYPCP04921 128 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 ADRA2AP08913 450 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 LGALS1P09382 135 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 SMIM17P0DL12 118 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 C1GALT1C1LP0DN25 315 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 NTF3P20783 257 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 ZNF140P52738 457 aaPredicted RBP3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 LCN6P62502 163 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 CAV1Q03135 178 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 RHEBQ15382 184 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 Q6ZS49 121 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 OR13C8Q8NGS7 320 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 SLC25A40Q8TBP6 338 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 FRZBQ92765 325 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 RBPMSQ93062 196 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 C12orf43Q96C57 262 aaKnown RBP3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 PBDC1Q9BVG4 233 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 COMMD5Q9GZQ3 224 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 OR2D2Q9H210 308 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 PDFQ9HBH1 243 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 FBXL12Q9NXK8 326 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 CHD5Q8TDI0 1954 aa3.68□□□□□ -1.82
CTNNA1-202ENST00000517533 KIF24Q5T7B8 1368 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 ABCA5Q8WWZ7 1642 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 ZNF318Q5VUA4 2279 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 MEGF6O75095 1541 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 IGHV3-21A0A0B4J1V1 117 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 A8MWP4 228 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 K7ERS5 55 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 RBFOX2O43251 390 aaKnown RBP eCLIP3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 CCNKO75909 580 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 NRASP01111 189 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 HRASP01112 189 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 KRASP01116 189 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 PDYNP01213 254 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 IGKV3-15P01624 115 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 TRGV3P03979 118 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 CSN2P05814 226 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 CD7P09564 240 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 IL1RNP18510 177 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 NPY1RP25929 384 aa3.67□□□□□ -1.82
CTNNA1-202ENST00000517533 ATP5G3P48201 142 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms