RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 AESQ08117 197 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SSPNQ14714 243 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 DCAF10Q5QP82 559 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 COL4A6Q14031 1691 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 MARCH11A6NNE9 402 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SFTPCP11686 197 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 COX6A1P12074 109 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 GCHFRP30047 84 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 OPRK1P41145 380 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 WNT5AP41221 380 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 UBE2L3P68036 154 aaKnown RBP5.64□□□□□ -1.51
CPNE3-203ENST00000517490 S100A7AQ86SG5 101 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SCCPDHQ8NBX0 429 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 OR1L4Q8NGR5 311 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 ZPBPQ9BS86 351 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 DEFB127Q9H1M4 99 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF576Q9H609 170 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SIT1Q9Y3P8 196 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 FANCMQ8IYD8 2048 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 UNC13CQ8NB66 2214 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 C19orf67A6NJJ6 358 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM50AO95807 157 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 C1QTNF9P0C862 333 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 FABP6P51161 128 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 Q56UQ5 140 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM14EPQ6UXP3 125 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 VASH2Q86V25 355 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 WDR31Q8NA23 367 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SMRP1Q8NCR6 262 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 PLPPR2Q96GM1 343 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SNHG12Q9BXW3 62 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TWSG1Q9GZX9 223 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SAP30LQ9HAJ7 183 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 HSPB7Q9UBY9 170 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 RNF115Q9Y4L5 304 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 OBSL1O75147 1896 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TRBV6-6A0A0A6YYG2 114 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 DPRXA6NFQ7 191 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 ISLRO14498 428 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TYMSP04818 313 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 SRIP30626 198 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 PAX9P55771 341 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 RPL31P62899 125 aaKnown RBP5.64□□□□□ -1.51
CPNE3-203ENST00000517490 IBA57Q5T440 356 aaKnown RBP5.64□□□□□ -1.51
CPNE3-203ENST00000517490 LINC01551Q86U37 167 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 GATAD1Q8WUU5 269 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 PLA2G3Q9NZ20 509 aa5.64□□□□□ -1.51
CPNE3-203ENST00000517490 TBL2Q9Y4P3 447 aaKnown RBP5.64□□□□□ -1.51
CPNE3-203ENST00000517490 K7EQM0 130 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 CD55P08174 381 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 STAG3L2P0CL84 134 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 CAMPP49913 170 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
CPNE3-203ENST00000517490 PQLC2Q6ZP29 291 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 LRRC29Q8WV35 223 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM208Q9BTX3 173 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SFXN3Q9BWM7 321 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 PRNDQ9UKY0 176 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 LOXL2Q9Y4K0 774 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TRGV10A0A0A0MS01 117 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 HIST1H1EP10412 219 aaKnown RBP5.63□□□□□ -1.51
CPNE3-203ENST00000517490 GNB2P62879 340 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TCF23Q7RTU1 214 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 MDP1Q86V88 176 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 KCNS1Q96KK3 526 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 PGPEP1Q9NXJ5 209 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TRAV24A0A0B4J272 114 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SCO2A0A1W2PP80 73 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 IGKV1-5P01602 117 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SP1P08047 785 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SELLP14151 372 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 MFAP2P55001 183 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SPINK14Q6IE38 97 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TEX38Q6PEX7 206 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 PCSK4Q6UW60 755 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 NKX6-3A6NJ46 265 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 J3QW42 95 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 NEURL1O76050 574 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 FBXW9Q5XUX1 488 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SLC35E4Q6ICL7 350 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 TMEM256Q8N2U0 113 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 SLC25A40Q8TBP6 338 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 C20orf144Q9BQM9 153 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
CPNE3-203ENST00000517490 A0A0G2JRQ6 117 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 K7ERU9 68 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 SLC17A3O00476 420 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 SLC35B1P78383 322 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CFHR1Q03591 330 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 OR2M7Q8NG81 312 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ELOVL5Q9NYP7 299 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 SEMA5BQ9P283 1151 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 POLR3KQ9Y2Y1 108 aaPredicted RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 WASHC3Q9Y3C0 194 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 A6NNC1 897 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 ZNF716A6NP11 495 aa5.62□□□□□ -1.51
CPNE3-203ENST00000517490 SLC25A5P05141 298 aaKnown RBP5.62□□□□□ -1.51
CPNE3-203ENST00000517490 CCL4P13236 92 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms