RNA–Protein interactions for RNA: ENST00000512820.5

LIMCH1-216, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-216ENST00000512820 FOXG1P55316 489 aaPredicted RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 P2RY6Q15077 328 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 ASCL4Q6XD76 172 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 PDPNQ86YL7 162 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 RND1Q92730 232 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 HARBI1Q96MB7 349 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 TMEM242Q9NWH2 141 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 MRPS18CQ9Y3D5 142 aaKnown RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 CACNA1DQ01668 2161 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 J3QW42 95 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 MT-ND6P03923 174 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 ETFRF1Q6IPR1 90 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 PQLC2Q6ZP29 291 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 OR1B1Q8NGR6 318 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 CDX2Q99626 313 aaPredicted RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 SMPD2O60906 423 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 WNT5AP41221 380 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 LHX2P50458 406 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 TAS2R60P59551 318 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 HSPE1P61604 102 aaKnown RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 RBPJQ06330 500 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 MOB3BQ86TA1 216 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 VSTM2AQ8TAG5 236 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 CCL17Q92583 94 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 ELOVL1Q9BW60 279 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 A0A1W2PN81 502 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 PINLYPA6NC86 204 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 RAMP3O60896 148 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 PTTG1IPP53801 180 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 MFAP2P55001 183 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 CLDN18P56856 261 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 C10orf113Q5VZT2 155 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 GATAD1Q8WUU5 269 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 BCL2L2Q92843 193 aaPredicted RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 SPSB4Q96A44 273 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 WDYHV1Q96HA8 205 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 OR2V2Q96R30 315 aa7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 TPRP12270 2363 aaKnown RBP7.1□□□□□ -1.27
LIMCH1-216ENST00000512820 C1QTNF9BB2RNN3 333 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 SNRPCP09234 159 aaKnown RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 CRYBB3P26998 211 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 GCHFRP30047 84 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 TIPARPQ7Z3E1 657 aaKnown RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 LYPD6Q86Y78 171 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 MMD2Q8IY49 270 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR4C5Q8NGB2 326 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 TMEM170AQ8WVE7 144 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 LEAP2Q969E1 77 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 ZDBF2Q9HCK1 2354 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 ALPK3Q96L96 1907 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 RBP4P02753 201 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 RPL31P62899 125 aaKnown RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 FXYD3Q14802 87 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 KIAA1644Q3SXP7 199 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 IBA57Q5T440 356 aaKnown RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 ZNF497Q6ZNH5 498 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR51G1Q8NGK1 321 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR1L8Q8NGR8 309 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 FLYWCH2Q96CP2 140 aaKnown RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 JPT1Q9UK76 154 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 S100A7P31151 101 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 PSG7Q13046 419 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 JOSD1Q15040 202 aaPredicted RBP7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 STPG3Q8N7X2 389 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR13A1Q8NGR1 328 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR5R1Q8NH85 324 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 K7ESF4 209 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 SCGB2A2Q13296 93 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 RPL39P5Q59GN2 51 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 ACP7Q6ZNF0 438 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 FA2HQ7L5A8 372 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 OR2D3Q8NGH3 330 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 ZNF355PQ9NSJ1 428 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 FOXJ2Q9P0K8 574 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
LIMCH1-216ENST00000512820 A0A0G2JRQ6 117 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 IGKV1-5P01602 117 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 CELA3BP08861 270 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 REG1BP48304 166 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 TRIP6Q15654 476 aaKnown RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 SMIM15Q7Z3B0 74 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 IMMP2LQ96T52 175 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 CCL13Q99616 98 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 VPS25Q9BRG1 176 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 DCTN5Q9BTE1 182 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 OPN3Q9H1Y3 402 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 SCO2A0A1W2PP80 73 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 SLC17A3O00476 420 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 HTR1DP28221 377 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 RSPO1Q2MKA7 263 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 Q56UQ5 140 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 RPP25LQ8N5L8 163 aaKnown RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 ATG101Q9BSB4 218 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 PAXXQ9BUH6 204 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 TRIOBPQ9H2D6 2365 aa7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 IL6RP08887 468 aaPredicted RBP7.08□□□□□ -1.28
LIMCH1-216ENST00000512820 HERPUD1Q15011 391 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms