RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 COMMD3Q9UBI1 195 aa10.27□□□□□ -0.77
RNF4-215ENST00000511843 SCOCQ9UIL1 159 aa10.27□□□□□ -0.77
RNF4-215ENST00000511843 PRELID3BQ9Y3B1 194 aa10.27□□□□□ -0.77
RNF4-215ENST00000511843 MSGN1A6NI15 193 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 TMEM127O75204 238 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 CDK10Q15131 360 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 GPR107Q5VW38 600 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 PYHIN1Q6K0P9 492 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 OVCH2Q7RTZ1 564 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 TMEM17Q86X19 198 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 MFSD4AQ8N468 514 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 TEX45Q8NA69 505 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 POC5Q8NA72 575 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 OR5AP2Q8NGF4 316 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 OSR1Q8TAX0 266 aaPredicted RBP10.26□□□□□ -0.77
RNF4-215ENST00000511843 PRR25Q96S07 402 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 SLC5A7Q9GZV3 580 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 COA4Q9NYJ1 87 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 EHFQ9NZC4 300 aa10.26□□□□□ -0.77
RNF4-215ENST00000511843 MRPS7Q9Y2R9 242 aaKnown RBP10.26□□□□□ -0.77
RNF4-215ENST00000511843 ANKRD34BA5PLL1 514 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 LINC01619G3V211 115 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 HPGDSO60760 199 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 RAMP3O60896 148 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 RBMXL2O75526 392 aaKnown RBP10.25□□□□□ -0.77
RNF4-215ENST00000511843 SLC22A5O76082 557 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 PMP2P02689 132 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 PRH1P02810 166 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 ECI1P42126 302 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 CBX5P45973 191 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 RFX2P48378 723 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 DGCR2P98153 550 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 C9orf66Q5T8R8 295 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 SSX9Q7RTT3 188 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 OR4S2Q8NH73 311 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 SRSF12Q8WXF0 261 aaKnown RBP10.25□□□□□ -0.77
RNF4-215ENST00000511843 RHOVQ96L33 236 aa10.25□□□□□ -0.77
RNF4-215ENST00000511843 HSD17B10Q99714 261 aaKnown RBP10.25□□□□□ -0.77
RNF4-215ENST00000511843 SULT1C2O00338 296 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 OVOL1O14753 267 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 MPPED1O15442 326 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 MYOD1P15172 320 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 ELK1P19419 428 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 CD40LGP29965 261 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 CTF1Q16619 201 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 RNASE12Q5GAN4 147 aaKnown RBP10.24□□□□□ -0.77
RNF4-215ENST00000511843 ZNF818PQ6ZRF7 136 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 C19orf35Q6ZS72 473 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 SNX29P2Q8IUI4 249 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 KCTD12Q96CX2 325 aaKnown RBP10.24□□□□□ -0.77
RNF4-215ENST00000511843 SLA2Q9H6Q3 261 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 ANAPC10Q9UM13 185 aa10.24□□□□□ -0.77
RNF4-215ENST00000511843 C13orf42A0A1B0GVH6 325 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 HMX3A6NHT5 357 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 KBTBD11O94819 623 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 GABARAPO95166 117 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 PRSS3P35030 304 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 DYRK1AQ13627 763 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 HAPLN4Q86UW8 402 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 ANKRD13BQ86YJ7 626 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 LYSMD2Q8IV50 215 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
RNF4-215ENST00000511843 OR51H1Q8NH63 302 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 GIMAP1Q8WWP7 306 aa10.23□□□□□ -0.77
RNF4-215ENST00000511843 ZNF2Q9BSG1 426 aaPredicted RBP10.23□□□□□ -0.77
RNF4-215ENST00000511843 TINAGL1Q9GZM7 467 aaPredicted RBP10.23□□□□□ -0.77
RNF4-215ENST00000511843 A0A1B0GW64 132 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 E7EUB6 86 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 H3BUA1 57 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 SAP30O75446 220 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 ACTL6BO94805 426 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 LY86O95711 162 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 TRBV12-3P01733 135 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 APOA1P02647 267 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 HSPB1P04792 205 aaKnown RBP10.22□□□□□ -0.77
RNF4-215ENST00000511843 OR9G9P0C7N8 305 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 RPA2P15927 270 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 HLA-DMAP28067 261 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 HRH1P35367 487 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 RORCP51449 518 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 HERV-K104P61576 105 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 ZNF45Q02386 682 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 MMD2Q8IY49 270 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 PUSL1Q8N0Z8 303 aaKnown RBP10.22□□□□□ -0.77
RNF4-215ENST00000511843 OR5H2Q8NGV7 314 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 MRPS26Q9BYN8 205 aaKnown RBP10.22□□□□□ -0.77
RNF4-215ENST00000511843 FXYD6Q9H0Q3 95 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 ADAM30Q9UKF2 790 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 SORL1Q92673 2214 aa10.22□□□□□ -0.77
RNF4-215ENST00000511843 FAM25AB3EWG3 89 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 FAM25CB3EWG5 89 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 FAM25GB3EWG6 89 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 OR2A4O95047 310 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 NAT1P18440 290 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 GNRHRP30968 328 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 ALDH3B2P48448 385 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 AADACL3Q5VUY0 350 aa10.21□□□□□ -0.77
RNF4-215ENST00000511843 OR4A47Q6IF82 309 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms