RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 BCL7BQ9BQE9 202 aa10.9□□□□□ -0.66
DDX41-212ENST00000511040 GNB4Q9HAV0 340 aa10.9□□□□□ -0.66
DDX41-212ENST00000511040 CCDC59Q9P031 241 aaKnown RBP10.9□□□□□ -0.66
DDX41-212ENST00000511040 ADAM30Q9UKF2 790 aa10.9□□□□□ -0.66
DDX41-212ENST00000511040 CEPT1Q9Y6K0 416 aa10.9□□□□□ -0.66
DDX41-212ENST00000511040 CCDC160A6NGH7 325 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 A6NHS1 94 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 M0QYG6 137 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 RAMP3O60896 148 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 APELAP0DMC3 54 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 CRIP2P52943 208 aaPredicted RBP10.89□□□□□ -0.67
DDX41-212ENST00000511040 RAB25P57735 213 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 TMEM267Q0VDI3 215 aaPredicted RBP10.89□□□□□ -0.67
DDX41-212ENST00000511040 KIAA0141Q14154 515 aaPredicted RBP10.89□□□□□ -0.67
DDX41-212ENST00000511040 PRSS8Q16651 343 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 SAMD5Q5TGI4 173 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 MRPL41Q8IXM3 137 aaKnown RBP10.89□□□□□ -0.67
DDX41-212ENST00000511040 LINC00482Q8N8I6 264 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 TEX45Q8NA69 505 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 OR5T1Q8NG75 326 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 OR51H1Q8NH63 302 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 MS4A10Q96PG2 267 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 C6orf62Q9GZU0 229 aaPredicted RBP10.89□□□□□ -0.67
DDX41-212ENST00000511040 FXYD6Q9H0Q3 95 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 KLK11Q9UBX7 282 aa10.89□□□□□ -0.67
DDX41-212ENST00000511040 CCL24O00175 119 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 GNRHRP30968 328 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 MYCNOSP40205 109 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 CDX1P47902 265 aaPredicted RBP10.88□□□□□ -0.67
DDX41-212ENST00000511040 RAB9AP51151 201 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 TSPAN5P62079 268 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 DGCR2P98153 550 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 MSMO1Q15800 293 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 TNXAQ16473 311 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 AADACL3Q5VUY0 350 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 SSX9Q7RTT3 188 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 SPAG16Q8N0X2 631 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 ZNF491Q8N8L2 437 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 ZBTB34Q8NCN2 500 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 WFDC9Q8NEX5 89 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 OR6F1Q8NGZ6 308 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 MYOZ3Q8TDC0 251 aa10.88□□□□□ -0.67
DDX41-212ENST00000511040 ZNF430Q9H8G1 570 aaPredicted RBP10.88□□□□□ -0.67
DDX41-212ENST00000511040 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 PRB2P02812 416 aaPredicted RBP10.87□□□□□ -0.67
DDX41-212ENST00000511040 KIR2DS2P43631 304 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 BEAN1Q3B7T3 259 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 PHLDA2Q53GA4 152 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 AKIRIN2Q53H80 203 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 C10orf55Q5SWW7 151 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 ASPHD1Q5U4P2 390 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 C4orf3Q8WVX3 66 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 FCAMRQ8WWV6 532 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 DIRAS2Q96HU8 199 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 P2RX4Q99571 388 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 PHB2Q99623 299 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 TINAGL1Q9GZM7 467 aaPredicted RBP10.87□□□□□ -0.67
DDX41-212ENST00000511040 SLIRPQ9GZT3 109 aaKnown RBP10.87□□□□□ -0.67
DDX41-212ENST00000511040 ALX4Q9H161 411 aaPredicted RBP10.87□□□□□ -0.67
DDX41-212ENST00000511040 ZNF355PQ9NSJ1 428 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 VSIG4Q9Y279 399 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 MEGF8Q7Z7M0 2845 aa10.87□□□□□ -0.67
DDX41-212ENST00000511040 NOTCH3Q9UM47 2321 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 WIPF1O43516 503 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 PGLYRP1O75594 196 aaPredicted RBP10.86□□□□□ -0.67
DDX41-212ENST00000511040 IGHV3-11P01762 117 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 RLN1P04808 185 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 SLC6A1P30531 599 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 TPPP2P59282 170 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 CATR1Q13166 79 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 TCTEX1D1Q8N7M0 179 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 OR5M8Q8NGP6 311 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 MCFD2Q8NI22 146 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 UBE2E2Q96LR5 201 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 MTFP1Q9UDX5 166 aa10.86□□□□□ -0.67
DDX41-212ENST00000511040 NOTCH1P46531 2555 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 MPPED1O15442 326 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 ACTL6BO94805 426 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 OR2A4O95047 310 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 TRGV3P03979 118 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 CD3DP04234 171 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 MYOD1P15172 320 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 RPA2P15927 270 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 DEFA5Q01523 94 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 IL18Q14116 193 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 RNASE10Q5GAN6 216 aaKnown RBP10.85□□□□□ -0.67
DDX41-212ENST00000511040 VAX1Q5SQQ9 334 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 MMD2Q8IY49 270 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
DDX41-212ENST00000511040 RHOVQ96L33 236 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 OR2A7Q96R45 310 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 TNCP24821 2201 aa10.85□□□□□ -0.67
DDX41-212ENST00000511040 GABARAPH6UMI1 98 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 I3L521 148 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 GPR31O00270 319 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 TPPPO94811 219 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 KBTBD11O94819 623 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 S1PR2O95136 353 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 HRASP01112 189 aa10.84□□□□□ -0.67
DDX41-212ENST00000511040 IFNA6P05013 189 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms