RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 OR5T1Q8NG75 326 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 OR5H2Q8NGV7 314 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 RAB2BQ8WUD1 216 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 ARPC1AQ92747 370 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 ADTRPQ96IZ2 230 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 ZFP57Q9NU63 452 aa10.54□□□□□ -0.72
SNF8-206ENST00000509989 TRAV3A0A0B4J244 114 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 SMIM31A0A1B0GVY4 71 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 A0A1B0GW64 132 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 RPA2P15927 270 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 CD33P20138 364 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 CDX1P47902 265 aaPredicted RBP10.53□□□□□ -0.72
SNF8-206ENST00000509989 LGALS7P47929 136 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 RAB9AP51151 201 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 UBE2KP61086 200 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 SSX9Q7RTT3 188 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 OR4D10Q8NGI6 311 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 MOB3AQ96BX8 217 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 DCUN1D5Q9BTE7 237 aa10.53□□□□□ -0.72
SNF8-206ENST00000509989 TINAGL1Q9GZM7 467 aaPredicted RBP10.53□□□□□ -0.72
SNF8-206ENST00000509989 SLIRPQ9GZT3 109 aaKnown RBP10.53□□□□□ -0.72
SNF8-206ENST00000509989 RBM38Q9H0Z9 239 aaKnown RBP10.53□□□□□ -0.72
SNF8-206ENST00000509989 ZNF430Q9H8G1 570 aaPredicted RBP10.53□□□□□ -0.72
SNF8-206ENST00000509989 I3L521 148 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 CCL24O00175 119 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 RGS5O15539 181 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 IGHV3-11P01762 117 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 RRASP10301 218 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 KRTAP10-11P60412 298 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 TNXAQ16473 311 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 PRSS8Q16651 343 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 KPRPQ5T749 579 aaPredicted RBP10.52□□□□□ -0.73
SNF8-206ENST00000509989 OR51H1Q8NH63 302 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 AP3S1Q92572 193 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
SNF8-206ENST00000509989 GON7Q9BXV9 100 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 ADAM30Q9UKF2 790 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 FOXA2Q9Y261 457 aaPredicted RBP10.52□□□□□ -0.73
SNF8-206ENST00000509989 TGP01266 2768 aa10.52□□□□□ -0.73
SNF8-206ENST00000509989 MSGN1A6NI15 193 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 CNIH1O95406 144 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 PRH1P02810 166 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 CD3DP04234 171 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 HOXD3P31249 432 aaPredicted RBP10.51□□□□□ -0.73
SNF8-206ENST00000509989 MYCNOSP40205 109 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 HERV-K104P61576 105 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 AKIRIN2Q53H80 203 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 ACTBL2Q562R1 376 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 AADACL3Q5VUY0 350 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 FOXB2Q5VYV0 432 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 FAAP20Q6NZ36 180 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 ZNF66Q6ZN08 573 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 SPAG16Q8N0X2 631 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 PUSL1Q8N0Z8 303 aaKnown RBP10.51□□□□□ -0.73
SNF8-206ENST00000509989 TEX45Q8NA69 505 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 OSR1Q8TAX0 266 aaPredicted RBP10.51□□□□□ -0.73
SNF8-206ENST00000509989 SCPEP1Q9HB40 452 aa10.51□□□□□ -0.73
SNF8-206ENST00000509989 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
SNF8-206ENST00000509989 HMX3A6NHT5 357 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 CGB1A6NKQ9 187 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 PGLYRP1O75594 196 aaPredicted RBP10.5□□□□□ -0.73
SNF8-206ENST00000509989 SLC22A5O76082 557 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 S1PR2O95136 353 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 RLN1P04808 185 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 RCVRNP35243 200 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 RAB25P57735 213 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 TAS2R46P59540 309 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 VMA21Q3ZAQ7 101 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 ZNF585BQ52M93 769 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 PHLDA2Q53GA4 152 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 OR11H1Q8NG94 326 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 C4orf3Q8WVX3 66 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 SRSF12Q8WXF0 261 aaKnown RBP10.5□□□□□ -0.73
SNF8-206ENST00000509989 MRGPRFQ96AM1 343 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 UBE2E2Q96LR5 201 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 C6orf62Q9GZU0 229 aaPredicted RBP10.5□□□□□ -0.73
SNF8-206ENST00000509989 MTFP1Q9UDX5 166 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 SCOCQ9UIL1 159 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 PRELID3BQ9Y3B1 194 aa10.5□□□□□ -0.73
SNF8-206ENST00000509989 IGHV4OR15-8A0A075B7B6 117 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 A0A087WW49 117 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 IL6RP08887 468 aaPredicted RBP10.49□□□□□ -0.73
SNF8-206ENST00000509989 PI3P19957 117 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 SLURP1P55000 103 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 CBX3Q13185 183 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 FHL3Q13643 280 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 TMEM65Q6PI78 240 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 OR4S2Q8NH73 311 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 BCL7BQ9BQE9 202 aa10.49□□□□□ -0.73
SNF8-206ENST00000509989 NXF2Q9GZY0 626 aaKnown RBP10.49□□□□□ -0.73
SNF8-206ENST00000509989 TEX22C9J3V5 150 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 KBTBD11O94819 623 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 TRGV3P03979 118 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 ZNF735P0CB33 412 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 TNFSF8P32971 234 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 TPPP2P59282 170 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 TSPAN5P62079 268 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 ZNF45Q02386 682 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 MSMO1Q15800 293 aa10.48□□□□□ -0.73
SNF8-206ENST00000509989 PDLIM3Q53GG5 364 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms