RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 LINC00310P59036 64 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 TRIP6Q15654 476 aaKnown RBP11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 ABHD17BQ5VST6 288 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 NINJ1Q92982 152 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 PLPPR2Q96GM1 343 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 METRNQ9UJH8 293 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 PSG11Q9UQ72 335 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 COL27A1Q8IZC6 1860 aaPredicted RBP11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 OOEPA6NGQ2 149 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 CBLN1P23435 193 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 OR10J1P30954 320 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 DUSP3P51452 185 aaPredicted RBP11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 LTC4SQ16873 150 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 Q6ZWC4 215 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 CMTM2Q8TAZ6 248 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 TAAR6Q96RI8 345 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 DCTN5Q9BTE1 182 aa11.18□□□□□ -0.62
SNCAIP-209ENST00000508017 KITLGP21583 273 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 MPV17P39210 176 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 PSG7Q13046 419 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 FBXW9Q5XUX1 488 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 OR13A1Q8NGR1 328 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 ZCCHC14Q8WYQ9 949 aaKnown RBP11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 R3HDM4Q96D70 268 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 ZDHHC11Q9H8X9 412 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 FRMD6-AS1P0C7T7 363 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 MIC13Q5XKP0 118 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 SLC35E4Q6ICL7 350 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF705AQ6ZN79 300 aaPredicted RBP11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 NANOS1Q8WY41 292 aaKnown RBP11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 MGST2Q99735 147 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 HES4Q9HCC6 221 aa11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 YTHDF2Q9Y5A9 579 aaKnown RBP11.17□□□□□ -0.62
SNCAIP-209ENST00000508017 COL6A3P12111 3177 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 A6NNC1 897 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 F2Z2F3 143 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 SLC17A3O00476 420 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 AQP7O14520 342 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 HPRT1P00492 218 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 TIMP3P35625 211 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 TOMM20LQ6UXN7 152 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 C11orf53Q8IXP5 236 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 VKORC1L1Q8N0U8 176 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 RAB1CQ92928 201 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 FAM234AQ9H0X4 552 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 YPEL1O60688 119 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 CDKN1AP38936 164 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 YPEL3P61236 119 aaPredicted RBP11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 FOXF2Q12947 444 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 OR10G8Q8NGN5 311 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 Q8TCH9 128 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 TMEM68Q96MH6 324 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 YPEL2Q96QA6 119 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 MS4A5Q9H3V2 200 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 OBP2BQ9NPH6 170 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 TMEM106BQ9NUM4 274 aa11.16□□□□□ -0.62
SNCAIP-209ENST00000508017 K7EN84 100 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 PROP1O75360 226 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 TMEM249Q2WGJ8 235 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 PRAMEF6Q5VXH4 476 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 IER2Q9BTL4 223 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 GGTLC1Q9BX51 225 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 DEFB127Q9H1M4 99 aa11.15□□□□□ -0.62
SNCAIP-209ENST00000508017 FCGR3BO75015 233 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 SERF1AO75920 110 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 WISP2O76076 250 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 STAG3L2P0CL84 134 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 STAG3L3P0CL85 134 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 MEOX1P50221 254 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 SSMEM1Q8WWF3 244 aa11.15□□□□□ -0.63
SNCAIP-209ENST00000508017 TRAV3A0A0B4J244 114 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 IQCF6A8MYZ5 107 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 OPRK1P41145 380 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 UBE2NP61088 152 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 ZNF90Q03938 601 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 ABHD12Q8N2K0 398 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 C1orf159Q96HA4 380 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 BTF3L4Q96K17 158 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 HSD17B10Q99714 261 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 HSPB9Q9BQS6 159 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 MRPL18Q9H0U6 180 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 PARD6AQ9NPB6 346 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 RYDENQ9NUL5 291 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 IL17BQ9UHF5 180 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 LYZL6O75951 148 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 IGHV3-13P01766 116 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 IGHV3-7P01780 117 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 BTF3P20290 206 aaKnown RBP11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 SELENOTP62341 195 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 GABRA6Q16445 453 aa11.14□□□□□ -0.63
SNCAIP-209ENST00000508017 ZNF718Q3SXZ3 478 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms