RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 TRAV3A0A0B4J244 114 aa12□□□□□ -0.49
DDX41-208ENST00000507955 CXorf65A6NEN9 183 aa12□□□□□ -0.49
DDX41-208ENST00000507955 M0R1X1 148 aa12□□□□□ -0.49
DDX41-208ENST00000507955 LHBP01229 141 aa12□□□□□ -0.49
DDX41-208ENST00000507955 IGHV1-46P01743 117 aa12□□□□□ -0.49
DDX41-208ENST00000507955 CRYABP02511 175 aaKnown RBP12□□□□□ -0.49
DDX41-208ENST00000507955 CD40P25942 277 aa12□□□□□ -0.49
DDX41-208ENST00000507955 CEACAM8P31997 349 aaPredicted RBP12□□□□□ -0.49
DDX41-208ENST00000507955 DUTP33316 252 aaKnown RBP12□□□□□ -0.49
DDX41-208ENST00000507955 FAM169BQ8N8A8 192 aa12□□□□□ -0.49
DDX41-208ENST00000507955 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
DDX41-208ENST00000507955 DTD1Q8TEA8 209 aa12□□□□□ -0.49
DDX41-208ENST00000507955 CCL13Q99616 98 aa12□□□□□ -0.49
DDX41-208ENST00000507955 SPTBN4Q9H254 2564 aa12□□□□□ -0.49
DDX41-208ENST00000507955 TPRP12270 2363 aaKnown RBP12□□□□□ -0.49
DDX41-208ENST00000507955 CLDN14O95500 239 aa12□□□□□ -0.49
DDX41-208ENST00000507955 GYPAP02724 150 aa12□□□□□ -0.49
DDX41-208ENST00000507955 NBL1P41271 181 aa12□□□□□ -0.49
DDX41-208ENST00000507955 RAB2AP61019 212 aa12□□□□□ -0.49
DDX41-208ENST00000507955 HBG1P69891 147 aa12□□□□□ -0.49
DDX41-208ENST00000507955 HBG2P69892 147 aa12□□□□□ -0.49
DDX41-208ENST00000507955 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
DDX41-208ENST00000507955 FAM216BQ8N7L0 139 aa12□□□□□ -0.49
DDX41-208ENST00000507955 ZBTB34Q8NCN2 500 aa12□□□□□ -0.49
DDX41-208ENST00000507955 MBD3L1Q8WWY6 194 aa12□□□□□ -0.49
DDX41-208ENST00000507955 RAI1Q7Z5J4 1906 aaPredicted RBP12□□□□□ -0.49
DDX41-208ENST00000507955 IGLV3-9A0A075B6K5 115 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 CEBPZOSA8MTT3 80 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 MGST3O14880 152 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 MDKP21741 143 aaPredicted RBP11.99□□□□□ -0.49
DDX41-208ENST00000507955 COL8A2P25067 703 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 TNFAIP6P98066 277 aaPredicted RBP11.99□□□□□ -0.49
DDX41-208ENST00000507955 TFF3Q07654 80 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 Q8NA96 180 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 FRZBQ92765 325 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 TAF15Q92804 592 aaKnown RBP eCLIP11.99□□□□□ -0.49
DDX41-208ENST00000507955 R3HDM4Q96D70 268 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 SNX22Q96L94 193 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 DYSFO75923 2080 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 MMP23AO75900 390 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 MSMO1Q15800 293 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 SFXN3Q9BWM7 321 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 GPR61Q9BZJ8 451 aa11.99□□□□□ -0.49
DDX41-208ENST00000507955 TET2Q6N021 2002 aaPredicted RBP11.99□□□□□ -0.49
DDX41-208ENST00000507955 ASH1LQ9NR48 2969 aaKnown RBP11.98□□□□□ -0.49
DDX41-208ENST00000507955 MKRN2OSH3BPM6 223 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 PHOX2AO14813 284 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 GZMHP20718 246 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 HTD2P86397 168 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 ACSM6Q6P461 480 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 RPP25LQ8N5L8 163 aaKnown RBP11.98□□□□□ -0.49
DDX41-208ENST00000507955 FAM210BQ96KR6 192 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 LRFN3Q9BTN0 628 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 IFI27L2Q9H2X8 130 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 GAR1Q9NY12 217 aaKnown RBP11.98□□□□□ -0.49
DDX41-208ENST00000507955 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 PMS2P5A8MQ11 134 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 ADH4P08319 380 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 GNG10P50151 68 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 C4orf17Q53FE4 359 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 C9orf152Q5JTZ5 239 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 HIST3H2BBQ8N257 126 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 OR10D4PQ8NGN7 298 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
DDX41-208ENST00000507955 SDF2L1Q9HCN8 221 aa11.98□□□□□ -0.49
DDX41-208ENST00000507955 DSCAML1Q8TD84 2053 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 TNCP24821 2201 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 RND2P52198 227 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 LURAP1LQ8IV03 231 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 HSD17B10Q99714 261 aaKnown RBP11.97□□□□□ -0.49
DDX41-208ENST00000507955 MAP1LC3B2A6NCE7 125 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 MYOD1P15172 320 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 NUBP1P53384 320 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 MZT1Q08AG7 82 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 CT45A1Q5HYN5 189 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 TCF23Q7RTU1 214 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 ZNF383Q8NA42 475 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 CT45A3Q8NHU0 189 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 MAP1LC3BQ9GZQ8 125 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 SLC25A22Q9H936 323 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
DDX41-208ENST00000507955 DPRXA6NFQ7 191 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 B4DEV8 164 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 CFHR2P36980 270 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 TDGF1P3P51864 188 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 KRTCAP3Q53RY4 240 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 TMEM41BQ5BJD5 291 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 WDR25Q64LD2 544 aaPredicted RBP11.96□□□□□ -0.49
DDX41-208ENST00000507955 ZNF66Q6ZN08 573 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 RNF7Q9UBF6 113 aa11.96□□□□□ -0.49
DDX41-208ENST00000507955 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
DDX41-208ENST00000507955 PIGBOS1A0A0B4J2F0 54 aa11.96□□□□□ -0.5
DDX41-208ENST00000507955 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.5
DDX41-208ENST00000507955 RAB29O14966 203 aa11.96□□□□□ -0.5
DDX41-208ENST00000507955 S100A2P29034 98 aa11.96□□□□□ -0.5
DDX41-208ENST00000507955 CD81P60033 236 aa11.96□□□□□ -0.5
DDX41-208ENST00000507955 BSPH1Q075Z2 132 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms