RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 VENTXO95231 258 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 FBP1P09467 338 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 CD99P14209 185 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 SRP14P37108 136 aaKnown RBP14.04□□□□□ -0.16
RNF4-209ENST00000507784 H2BFSP57053 126 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 SPNS3Q6ZMD2 512 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 BCL6BQ8N143 479 aaPredicted RBP14.04□□□□□ -0.16
RNF4-209ENST00000507784 OR2T10Q8NGZ9 312 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 OR1S1Q8NH92 325 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 C22orf15Q8WYQ4 148 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 WDR89Q96FK6 387 aaPredicted RBP14.04□□□□□ -0.16
RNF4-209ENST00000507784 RITA1Q96K30 269 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 ABCA1O95477 2261 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 ITPR3Q14573 2671 aa14.04□□□□□ -0.16
RNF4-209ENST00000507784 SCGB1D2O95969 90 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 MOSP00540 346 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 FSHBP01225 129 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 VMA21Q3ZAQ7 101 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 NMSQ5H8A3 153 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 FAM219AQ8IW50 185 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 ZBTB8BQ8NAP8 495 aaPredicted RBP14.03□□□□□ -0.16
RNF4-209ENST00000507784 RHOVQ96L33 236 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 TSNAXQ99598 290 aaKnown RBP14.03□□□□□ -0.16
RNF4-209ENST00000507784 SMR3AQ99954 134 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 NEURL2Q9BR09 285 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 MEGF9Q9H1U4 602 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 TMEM140Q9NV12 185 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 CACNG5Q9UF02 275 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 BAHCC1Q9P281 2608 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 VPS13CQ709C8 3753 aa14.03□□□□□ -0.16
RNF4-209ENST00000507784 SRRM4A7MD48 611 aaKnown RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 RBMXL2O75526 392 aaKnown RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 NXPH3O95157 252 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 LY6G6DO95868 133 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 GIPP09681 153 aaPredicted RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 OR9G9P0C7N8 305 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 FAM106CPP0CH98 169 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 TMEM11P17152 192 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 CNTFRP26992 372 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 LGALS7P47929 136 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 CYCSP99999 105 aaKnown RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 HABP2Q14520 560 aaPredicted RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 SMCO1Q147U7 214 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 DEFB112Q30KQ8 113 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 OR4A47Q6IF82 309 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 OR4A16Q8NH70 328 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 EAF1Q96JC9 268 aaPredicted RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 ST6GAL2Q96JF0 529 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 FYTTD1Q96QD9 318 aaKnown RBP14.02□□□□□ -0.17
RNF4-209ENST00000507784 NSG2Q9Y328 171 aa14.02□□□□□ -0.17
RNF4-209ENST00000507784 A0A1B0GU03 582 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 MDFIC2A0A1B0GVS7 189 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 SLC25A17O43808 307 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 SNAPC5O75971 98 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 OR2A4O95047 310 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 SAA1P0DJI8 122 aaPredicted RBP14.01□□□□□ -0.17
RNF4-209ENST00000507784 HNF1AP20823 631 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 RAP2BP61225 183 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 CD300CQ08708 224 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 LRRC75BQ2VPJ9 315 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 Q6ZRM9 215 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 OR2A7Q96R45 310 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 SSX3Q99909 188 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 RNF5Q99942 180 aa14.01□□□□□ -0.17
RNF4-209ENST00000507784 TRAV3A0A0B4J244 114 aa14□□□□□ -0.17
RNF4-209ENST00000507784 FAM90A9PA6NNJ1 464 aa14□□□□□ -0.17
RNF4-209ENST00000507784 SMLR1H3BR10 107 aa14□□□□□ -0.17
RNF4-209ENST00000507784 IGLV2-23P01705 113 aa14□□□□□ -0.17
RNF4-209ENST00000507784 S100A10P60903 97 aa14□□□□□ -0.17
RNF4-209ENST00000507784 PLGLAQ15195 96 aa14□□□□□ -0.17
RNF4-209ENST00000507784 PSG5Q15238 335 aa14□□□□□ -0.17
RNF4-209ENST00000507784 POU2AF1Q16633 256 aa14□□□□□ -0.17
RNF4-209ENST00000507784 LRRC37A5PQ49AS3 106 aa14□□□□□ -0.17
RNF4-209ENST00000507784 THNSL2Q86YJ6 484 aa14□□□□□ -0.17
RNF4-209ENST00000507784 FOXRED2Q8IWF2 684 aa14□□□□□ -0.17
RNF4-209ENST00000507784 TMUB1Q9BVT8 246 aa14□□□□□ -0.17
RNF4-209ENST00000507784 NMES1Q9C002 83 aa14□□□□□ -0.17
RNF4-209ENST00000507784 CTNNBIP1Q9NSA3 81 aaPredicted RBP14□□□□□ -0.17
RNF4-209ENST00000507784 KIAA1456Q9P272 454 aa14□□□□□ -0.17
RNF4-209ENST00000507784 LSM5Q9Y4Y9 91 aaKnown RBP14□□□□□ -0.17
RNF4-209ENST00000507784 NCBP2LA6PVI3 153 aaKnown RBP13.99□□□□□ -0.17
RNF4-209ENST00000507784 UPK2O00526 184 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 P0C879 139 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 OR2B8PP59922 312 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 UBE2KP61086 200 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 SRSF4Q08170 494 aaKnown RBP13.99□□□□□ -0.17
RNF4-209ENST00000507784 MMDQ15546 238 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 LY6EQ16553 131 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 PUSL1Q8N0Z8 303 aaKnown RBP13.99□□□□□ -0.17
RNF4-209ENST00000507784 OR2T35Q8NGX2 323 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 VSTM2AQ8TAG5 236 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 CLCC1Q96S66 551 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 BET1LQ9NYM9 111 aa13.99□□□□□ -0.17
RNF4-209ENST00000507784 METTL1Q9UBP6 276 aaKnown RBP13.99□□□□□ -0.17
RNF4-209ENST00000507784 CYSRT1A8MQ03 144 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 H3BUX3 64 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 NBR2O15453 112 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 SLC25A6P12236 298 aa13.98□□□□□ -0.17
RNF4-209ENST00000507784 NKX2-1P43699 371 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms