RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TCRBP04435 133 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 HKR1P10072 659 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 TRIM16LQ309B1 348 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 C9orf152Q5JTZ5 239 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 FAM71E2Q8N5Q1 922 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 DMBX1Q8NFW5 382 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 OR4A5Q8NH83 315 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 GALNT14Q96FL9 552 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 BEX1Q9HBH7 125 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 TBC1D24Q9ULP9 559 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 NUBP2Q9Y5Y2 271 aa15.99■□□□□ 0.15
USP53-203ENST00000507597 SLC25A17O43808 307 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 ACTL6BO94805 426 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 OR2A4O95047 310 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 RAG2P55895 527 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 SLC25A42Q86VD7 318 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 PPP1R27Q86WC6 154 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 FOXRED2Q8IWF2 684 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 CADM3Q8N126 398 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 RHOVQ96L33 236 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 OR2A7Q96R45 310 aa15.98■□□□□ 0.15
USP53-203ENST00000507597 RAMP3O60896 148 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 HLA-DRB1P01911 266 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 UCP1P25874 307 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 BTCP35070 178 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 RAB25P57735 213 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 DCTN2Q13561 401 aaKnown RBP15.97■□□□□ 0.15
USP53-203ENST00000507597 POU2AF1Q16633 256 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 PLET1Q6UQ28 207 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 ZNF695Q8IW36 515 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 MMD2Q8IY49 270 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 R3HDM4Q96D70 268 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 ALX4Q9H161 411 aaPredicted RBP15.97■□□□□ 0.15
USP53-203ENST00000507597 FBXL15Q9H469 300 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 C16orf95Q9H693 158 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 SIGLEC9Q9Y336 463 aa15.97■□□□□ 0.15
USP53-203ENST00000507597 S1PR2O95136 353 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 OR5AC1P0C628 307 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 VAMP1P23763 118 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 CNTFRP26992 372 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 BLCAPP62952 87 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 IFITM3Q01628 133 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 KRTAP21-3Q3LHN1 58 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 SLC35E3Q7Z769 313 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 ADAD2Q8NCV1 583 aaKnown RBP15.96■□□□□ 0.15
USP53-203ENST00000507597 DUSP18Q8NEJ0 188 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 RNASE11Q8TAA1 199 aaKnown RBP15.96■□□□□ 0.15
USP53-203ENST00000507597 IL22RA2Q969J5 263 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 RRNAD1Q96FB5 475 aaKnown RBP15.96■□□□□ 0.15
USP53-203ENST00000507597 RITA1Q96K30 269 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 GON7Q9BXV9 100 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 TMEM222Q9H0R3 208 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 C20orf85Q9H1P6 137 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 BET1LQ9NYM9 111 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 ZFHX3Q15911 3703 aa15.96■□□□□ 0.15
USP53-203ENST00000507597 MARCH11A6NNE9 402 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 SRRM4A7MD48 611 aaKnown RBP15.95■□□□□ 0.14
USP53-203ENST00000507597 ARPC1BO15143 372 aaKnown RBP15.95■□□□□ 0.14
USP53-203ENST00000507597 SNAPC5O75971 98 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 IGLV2-23P01705 113 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 H2AFB2P0C5Z0 115 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 SAA1P0DJI8 122 aaPredicted RBP15.95■□□□□ 0.14
USP53-203ENST00000507597 MAS1LP35410 378 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 VDAC2P45880 294 aaPredicted RBP15.95■□□□□ 0.14
USP53-203ENST00000507597 BRWD1-AS2P59051 145 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 ZNF585BQ52M93 769 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 ZNF562Q6V9R5 426 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 Q6ZSV7 163 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 LGI3Q8N145 548 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 Q8N2B8 174 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 TP53RKQ96S44 253 aa15.95■□□□□ 0.14
USP53-203ENST00000507597 CNIH1O95406 144 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 CDS2O95674 445 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 KRASP01116 189 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 IGHG2P01859 326 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 FGF2P09038 288 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 AKR1C2P52895 323 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 TMEM267Q0VDI3 215 aaPredicted RBP15.94■□□□□ 0.14
USP53-203ENST00000507597 SP6Q3SY56 376 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 C4orf46Q504U0 113 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 SSX9Q7RTT3 188 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 H2BFWTQ7Z2G1 175 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 FAM219AQ8IW50 185 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 RBPMSQ93062 196 aaKnown RBP15.94■□□□□ 0.14
USP53-203ENST00000507597 TMEM230Q96A57 120 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 NUDT15Q9NV35 164 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 FKBP11Q9NYL4 201 aa15.94■□□□□ 0.14
USP53-203ENST00000507597 TMEM89A2RUT3 159 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 CLPSL1A2RUU4 121 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 AP4M1O00189 453 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 SFT2D2O95562 160 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 PTTG1O95997 202 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 AMY1AP04745 511 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 CRYGBP07316 175 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 VSIG10L2P0DP72 767 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 SRSF2Q01130 221 aaKnown RBP15.93■□□□□ 0.14
USP53-203ENST00000507597 FBLN7Q53RD9 439 aa15.93■□□□□ 0.14
USP53-203ENST00000507597 PUSL1Q8N0Z8 303 aaKnown RBP15.93■□□□□ 0.14
USP53-203ENST00000507597 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.93■□□□□ 0.14
USP53-203ENST00000507597 COQ8AQ8NI60 647 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms