RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CDK10Q15131 360 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR2B11Q5JQS5 317 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 SLC35E3Q7Z769 313 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 ZNF329Q86UD4 541 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR5AU1Q8NGC0 362 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR5AP2Q8NGF4 316 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 SECTM1Q8WVN6 248 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 CMTM3Q96MX0 182 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 CLCC1Q96S66 551 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 BCL7BQ9BQE9 202 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 DCUN1D5Q9BTE7 237 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 C6orf62Q9GZU0 229 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-205ENST00000506924 GHITMQ9H3K2 345 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 SLC35D1Q9NTN3 355 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 NECAP2Q9NVZ3 263 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 EHFQ9NZC4 300 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 CCDC59Q9P031 241 aaKnown RBP7.47□□□□□ -1.21
CLCN3-205ENST00000506924 WASHC3Q9Y3C0 194 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR2W1Q9Y3N9 320 aa7.47□□□□□ -1.21
CLCN3-205ENST00000506924 OR5H14A6NHG9 310 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 LINC00473A8K010 186 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 NBR2O15453 112 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 TNFSF12O43508 249 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 APOA2P02652 100 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 MC5RP33032 325 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 HRH1P35367 487 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 FOXI1Q12951 378 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 PLGLAQ15195 96 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 NSUN5P1Q3KNT7 163 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 TMEM17Q86X19 198 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 FAM71E2Q8N5Q1 922 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 ZNF645Q8N7E2 425 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 RNF152Q8N8N0 203 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-205ENST00000506924 OR5H2Q8NGV7 314 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 OR52I2Q8NH67 350 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 GPX8Q8TED1 209 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 ABHD1Q96SE0 405 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 SLIRPQ9GZT3 109 aaKnown RBP7.46□□□□□ -1.22
CLCN3-205ENST00000506924 RBM38Q9H0Z9 239 aaKnown RBP7.46□□□□□ -1.22
CLCN3-205ENST00000506924 CCL28Q9NRJ3 127 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 LIN7CQ9NUP9 197 aaKnown RBP7.46□□□□□ -1.22
CLCN3-205ENST00000506924 KIAA1456Q9P272 454 aa7.46□□□□□ -1.22
CLCN3-205ENST00000506924 PSMB11A5LHX3 300 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 FCN1O00602 326 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 PPYP01298 95 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 IGLV2-14P01704 120 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 IGHG2P01859 326 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 DUTP33316 252 aaKnown RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 RPL30P62888 115 aaKnown RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 PSG5Q15238 335 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 C5orf64Q2M2E5 130 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 OR8H1Q8NGG4 311 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 MCFD2Q8NI22 146 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 FAM110DQ8TAY7 271 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 DIRAS2Q96HU8 199 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 CITED2Q99967 270 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 ZNF2Q9BSG1 426 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 KRTAP4-11Q9BYQ6 195 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 SLC5A7Q9GZV3 580 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 TAS2R8Q9NYW2 309 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 KLK11Q9UBX7 282 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 RSL24D1Q9UHA3 163 aaKnown RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 ZNF107Q9UII5 783 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 ANAPC10Q9UM13 185 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 GAB2Q9UQC2 676 aa7.45□□□□□ -1.22
CLCN3-205ENST00000506924 RBMX2Q9Y388 322 aaKnown RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 TET2Q6N021 2002 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-205ENST00000506924 RRHO14718 337 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 SLC25A17O43808 307 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 FCGR3BO75015 233 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
CLCN3-205ENST00000506924 THBS3P49746 956 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 IL18Q14116 193 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 TCTEX1D4Q5JR98 221 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 LIN54Q6MZP7 749 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 PDPNQ86YL7 162 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 FOXRED2Q8IWF2 684 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 STPG2Q8N412 459 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 OR2C3Q8N628 320 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 NPBQ8NG41 125 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 SGMS2Q8NHU3 365 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 WIPF2Q8TF74 440 aaPredicted RBP7.44□□□□□ -1.22
CLCN3-205ENST00000506924 ABHD5Q8WTS1 349 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 TCTEX1D2Q8WW35 142 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 GIMAP1Q8WWP7 306 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 SCPEP1Q9HB40 452 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 PARP11Q9NR21 331 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 METTL1Q9UBP6 276 aaKnown RBP7.44□□□□□ -1.22
CLCN3-205ENST00000506924 WSB1Q9Y6I7 421 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 A3GALT2U3KPV4 340 aa7.44□□□□□ -1.22
CLCN3-205ENST00000506924 IGHV7-81A0A0B4J1V7 117 aa7.43□□□□□ -1.22
CLCN3-205ENST00000506924 TCRBV4S1A1TA0A5B7 111 aa7.43□□□□□ -1.22
CLCN3-205ENST00000506924 SRRM4A7MD48 611 aaKnown RBP7.43□□□□□ -1.22
CLCN3-205ENST00000506924 G3V318 75 aa7.43□□□□□ -1.22
CLCN3-205ENST00000506924 M0QZ24 198 aa7.43□□□□□ -1.22
CLCN3-205ENST00000506924 SULT1C2O00338 296 aa7.43□□□□□ -1.22
CLCN3-205ENST00000506924 ATP6V0E1O15342 81 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms