RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 ZNF818PQ6ZRF7 136 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 C8orf86Q6ZUL3 223 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 OR6F1Q8NGZ6 308 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 MCFD2Q8NI22 146 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 BORCS5Q969J3 196 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 ABHD1Q96SE0 405 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 SLIRPQ9GZT3 109 aaKnown RBP10.25□□□□□ -0.77
TCOF1-209ENST00000506630 KLK11Q9UBX7 282 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 NOTCH3Q9UM47 2321 aa10.25□□□□□ -0.77
TCOF1-209ENST00000506630 M0QYG6 137 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 ARPC1BO15143 372 aaKnown RBP10.24□□□□□ -0.77
TCOF1-209ENST00000506630 TPPPO94811 219 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 CRYGBP07316 175 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 SAA1P0DJI8 122 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-209ENST00000506630 PSMB8P28062 276 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 PPIFP30405 207 aaKnown RBP10.24□□□□□ -0.77
TCOF1-209ENST00000506630 GNRHRP30968 328 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 UBE2KP61086 200 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 DGCR2P98153 550 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 TNXAQ16473 311 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 ACTBL2Q562R1 376 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 AADACL3Q5VUY0 350 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 FOXB2Q5VYV0 432 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 ZNF695Q8IW36 515 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 TCTEX1D1Q8N7M0 179 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 TEX45Q8NA69 505 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 LFNGQ8NES3 379 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 OR51H1Q8NH63 302 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 FCAMRQ8WWV6 532 aa10.24□□□□□ -0.77
TCOF1-209ENST00000506630 RSL24D1Q9UHA3 163 aaKnown RBP10.24□□□□□ -0.77
TCOF1-209ENST00000506630 FOXA2Q9Y261 457 aaPredicted RBP10.24□□□□□ -0.77
TCOF1-209ENST00000506630 GABARAPH6UMI1 98 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 EGR2P11161 476 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-209ENST00000506630 CD33P20138 364 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 PYHIN1Q6K0P9 492 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 SPAG16Q8N0X2 631 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 MINDY2Q8NBR6 621 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 RBM38Q9H0Z9 239 aaKnown RBP10.23□□□□□ -0.77
TCOF1-209ENST00000506630 MTFP1Q9UDX5 166 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 NUBP2Q9Y5Y2 271 aa10.23□□□□□ -0.77
TCOF1-209ENST00000506630 GPR31O00270 319 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 CREBL2O60519 120 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 RAMP3O60896 148 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 IGLV1-40P01703 118 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 CD3DP04234 171 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 RLN1P04808 185 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 IFNA6P05013 189 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 SLC6A1P30531 599 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 BRWD1-AS2P59051 145 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 TAS2R19P59542 299 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 SSBP2P81877 361 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 MRPS10P82664 201 aaKnown RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 PRSS8Q16651 343 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 DEFB136Q30KP8 78 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 AKIRIN2Q53H80 203 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 C19orf54Q5BKX5 351 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 RNASE10Q5GAN6 216 aaKnown RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 DEFB121Q5J5C9 76 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 C11orf87Q6NUJ2 197 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 ETV3LQ6ZN32 361 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 SSX9Q7RTT3 188 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 CMTM1Q8IZ96 169 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 POC5Q8NA72 575 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 CASTOR1Q8WTX7 329 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 DUX3Q96PT4 197 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 PHB2Q99623 299 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 TINAGL1Q9GZM7 467 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 KLK15Q9H2R5 256 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 ZNF430Q9H8G1 570 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 RABL2AQ9UBK7 228 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-209ENST00000506630 RABL2BQ9UNT1 228 aa10.22□□□□□ -0.77
TCOF1-209ENST00000506630 SOX15O60248 233 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 ACTL6BO94805 426 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 KBTBD11O94819 623 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 OR2A4O95047 310 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 HRASP01112 189 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 CD40LGP29965 261 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 CDX1P47902 265 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-209ENST00000506630 RAB9AP51151 201 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 MRGPRG-AS1Q2M3A8 158 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 PHLDA2Q53GA4 152 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 LCE2DQ5TA82 110 aaPredicted RBP10.21□□□□□ -0.77
TCOF1-209ENST00000506630 MMD2Q8IY49 270 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 OR5M8Q8NGP6 311 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 VSTM2AQ8TAG5 236 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 SMIM4Q8WVI0 70 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 WWC2-AS2Q96NR7 200 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 OR2A7Q96R45 310 aa10.21□□□□□ -0.77
TCOF1-209ENST00000506630 NXF2Q9GZY0 626 aaKnown RBP10.21□□□□□ -0.77
TCOF1-209ENST00000506630 ZNF701M0R085 212 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-209ENST00000506630 CTDSPLO15194 276 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 MPPED1O15442 326 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 RBFOX2O43251 390 aaKnown RBP eCLIP10.2□□□□□ -0.78
TCOF1-209ENST00000506630 PGLYRP1O75594 196 aaPredicted RBP10.2□□□□□ -0.78
TCOF1-209ENST00000506630 HPRT1P00492 218 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 APELAP0DMC3 54 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 PGAM2P15259 253 aa10.2□□□□□ -0.78
TCOF1-209ENST00000506630 IGLL1P15814 213 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms