RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
DDX41-204ENST00000504807 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
DDX41-204ENST00000504807 SMAD5-AS1Q9Y6J3 95 aa10.02□□□□□ -0.81
DDX41-204ENST00000504807 IZUMO1RA6ND01 250 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
DDX41-204ENST00000504807 IGLV1-51P01701 117 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 HLA-DQB1P01920 261 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 FCER2P06734 321 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 MYOD1P15172 320 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 UBE2KP61086 200 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 GVQW1Q8N7I0 195 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 CENPOQ9BU64 300 aa10.01□□□□□ -0.81
DDX41-204ENST00000504807 METTL21EPA6NDL7 271 aa10□□□□□ -0.81
DDX41-204ENST00000504807 H3BUA1 57 aa10□□□□□ -0.81
DDX41-204ENST00000504807 FCGR3BO75015 233 aa10□□□□□ -0.81
DDX41-204ENST00000504807 TUSC2O75896 110 aa10□□□□□ -0.81
DDX41-204ENST00000504807 TALDO1P37837 337 aa10□□□□□ -0.81
DDX41-204ENST00000504807 SYNJ2BPP57105 145 aa10□□□□□ -0.81
DDX41-204ENST00000504807 PITPNAQ00169 270 aa10□□□□□ -0.81
DDX41-204ENST00000504807 TNXAQ16473 311 aa10□□□□□ -0.81
DDX41-204ENST00000504807 ZNF343Q6P1L6 599 aa10□□□□□ -0.81
DDX41-204ENST00000504807 ZNF773Q6PK81 442 aa10□□□□□ -0.81
DDX41-204ENST00000504807 ZNF645Q8N7E2 425 aa10□□□□□ -0.81
DDX41-204ENST00000504807 TEX45Q8NA69 505 aa10□□□□□ -0.81
DDX41-204ENST00000504807 SRSF12Q8WXF0 261 aaKnown RBP10□□□□□ -0.81
DDX41-204ENST00000504807 ISOC1Q96CN7 298 aa10□□□□□ -0.81
DDX41-204ENST00000504807 THAP7Q9BT49 309 aaPredicted RBP10□□□□□ -0.81
DDX41-204ENST00000504807 AKIP1Q9NQ31 210 aa10□□□□□ -0.81
DDX41-204ENST00000504807 RBMX2Q9Y388 322 aaKnown RBP10□□□□□ -0.81
DDX41-204ENST00000504807 OR2W1Q9Y3N9 320 aa10□□□□□ -0.81
DDX41-204ENST00000504807 RBM7Q9Y580 266 aaKnown RBP10□□□□□ -0.81
DDX41-204ENST00000504807 DMRT1Q9Y5R6 373 aa10□□□□□ -0.81
DDX41-204ENST00000504807 HECTD4Q9Y4D8 3996 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 C13orf42A0A1B0GVH6 325 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 HMX3A6NHT5 357 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 CGB1A6NKQ9 187 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 BRI3O95415 125 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 CSN3P07498 182 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 RTL8BQ17RB0 113 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 ZMAT4Q9H898 229 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 RANGRFQ9HD47 186 aaPredicted RBP9.99□□□□□ -0.81
DDX41-204ENST00000504807 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 COA4Q9NYJ1 87 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 ANXA10Q9UJ72 324 aa9.99□□□□□ -0.81
DDX41-204ENST00000504807 TRBV9A0A0B4J1U6 114 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 LOC100506127A0A0U1RQW1 187 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 BMPR1BO00238 502 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 IL6RP08887 468 aaPredicted RBP9.98□□□□□ -0.81
DDX41-204ENST00000504807 IGHV4-30-4P0DP06 118 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 NEDD8Q15843 81 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 VMA21Q3ZAQ7 101 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 KCTD9Q7L273 389 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 TPRA1Q86W33 373 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 OR6Q1Q8NGQ2 317 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 OSR1Q8TAX0 266 aaPredicted RBP9.98□□□□□ -0.81
DDX41-204ENST00000504807 ACOT12Q8WYK0 555 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 SNAPC3Q92966 411 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 RSRP1Q9BUV0 290 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 DCSTAMPQ9H295 470 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 SSR3Q9UNL2 185 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 TNCP24821 2201 aa9.98□□□□□ -0.81
DDX41-204ENST00000504807 SORL1Q92673 2214 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 TRAV18A0A075B6X5 111 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 TNFSF12O43508 249 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 OR9G9P0C7N8 305 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 RRASP10301 218 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 AADACP22760 399 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 MECP2P51608 486 aaKnown RBP9.97□□□□□ -0.81
DDX41-204ENST00000504807 GNG2P59768 71 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 RHOGP84095 191 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 CDK10Q15131 360 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 CNIH2Q6PI25 160 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 PUSL1Q8N0Z8 303 aaKnown RBP9.97□□□□□ -0.81
DDX41-204ENST00000504807 OR9G4Q8NGQ1 327 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 FCGR1BQ92637 280 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 ADTRPQ96IZ2 230 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 OR4C12Q96R67 309 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 PHB2Q99623 299 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 CCL28Q9NRJ3 127 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 C19orf73Q9NVV2 129 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 TAS2R8Q9NYW2 309 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 PEF1Q9UBV8 284 aaKnown RBP9.97□□□□□ -0.81
DDX41-204ENST00000504807 SPATA2Q9UM82 520 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 SELENOKQ9Y6D0 94 aa9.97□□□□□ -0.81
DDX41-204ENST00000504807 MEIS3P1A6NDR6 274 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 PPP5D1E7EU14 171 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 HLA-AP01891 365 aaKnown RBP9.96□□□□□ -0.82
DDX41-204ENST00000504807 AREGP15514 252 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 CD36P16671 472 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 IDNKQ5T6J7 187 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 MFSD4AQ8N468 514 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 YTHDF1Q9BYJ9 559 aaKnown RBP9.96□□□□□ -0.82
DDX41-204ENST00000504807 EDA2RQ9HAV5 297 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 S4R3C0 116 aa9.96□□□□□ -0.82
DDX41-204ENST00000504807 TRAV3A0A0B4J244 114 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 A0A0G2JLM5 398 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 OR2J3O76001 311 aa9.95□□□□□ -0.82
DDX41-204ENST00000504807 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms