RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CIARTQ8N365 385 aaPredicted RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 FAM71E2Q8N5Q1 922 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 DMBX1Q8NFW5 382 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 OR4S2Q8NH73 311 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 R3HDM4Q96D70 268 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 RRNAD1Q96FB5 475 aaKnown RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 FOXC2Q99958 501 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 RANBP3Q9H6Z4 567 aaPredicted RBP8.37□□□□□ -1.07
TPM3-217ENST00000504663 HEXA-AS1Q9H8Q6 139 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 SLC35D1Q9NTN3 355 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 COA4Q9NYJ1 87 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 OR5AC2Q9NZP5 309 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 MBD2Q9UBB5 411 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 MMP24Q9Y5R2 645 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 CELSR1Q9NYQ6 3014 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 CCDC168Q8NDH2 2452 aa8.37□□□□□ -1.07
TPM3-217ENST00000504663 TRAV3A0A0B4J244 114 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PRD5 423 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PRF3 423 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 A0A1W2PRM7 423 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 MARCH11A6NNE9 402 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 B4DSR2 109 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 TMEM50AO95807 157 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 IFNA21P01568 189 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 IGHV4-38-2P0DP08 117 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 CXCL2P19875 107 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 PRRX1P54821 245 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 TMEM249Q2WGJ8 235 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 LGALSLQ3ZCW2 172 aaPredicted RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 CXorf66Q5JRM2 361 aaPredicted RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 DHRS7BQ6IAN0 325 aaPredicted RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 VKORC1L1Q8N0U8 176 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 PUSL1Q8N0Z8 303 aaKnown RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 LINC01356Q8N9X3 169 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 OR1S1Q8NH92 325 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 CD300LFQ8TDQ1 290 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 LHX4Q969G2 390 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 PDCD10Q9BUL8 212 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 PLSCR3Q9NRY6 295 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 DPM3Q9P2X0 92 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 CACNG5Q9UF02 275 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 AMMECR1Q9Y4X0 333 aaPredicted RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
TPM3-217ENST00000504663 FLNAP21333 2647 aaKnown RBP8.36□□□□□ -1.07
TPM3-217ENST00000504663 IGHV3-72A0A0B4J1Y9 119 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 A0A1B0GU03 582 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 MSGN1A6NI15 193 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 FAM90A9PA6NNJ1 464 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 HMSDA8MTL9 139 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TXNL1O43396 289 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 DEDDO75618 318 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 KRASP01116 189 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 CRYGBP07316 175 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 NQO2P16083 231 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 EPHA1P21709 976 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 PSMB6P28072 239 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 HTR1DP28221 377 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 SAA4P35542 130 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 PAX9P55771 341 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 SUMO1P63165 101 aaKnown RBP8.35□□□□□ -1.07
TPM3-217ENST00000504663 CYCSP99999 105 aaKnown RBP8.35□□□□□ -1.07
TPM3-217ENST00000504663 ID3Q02535 119 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 SMCO1Q147U7 214 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 LRRC37A5PQ49AS3 106 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 RUSC1-AS1Q66K80 236 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 PRSS54Q6PEW0 395 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TMEM65Q6PI78 240 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 Q8N6K4 173 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TMEM140Q9NV12 185 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TNFSF18Q9UNG2 199 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 PRELID3BQ9Y3B1 194 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 WASHC3Q9Y3C0 194 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TBL2Q9Y4P3 447 aaKnown RBP8.35□□□□□ -1.07
TPM3-217ENST00000504663 SOX21Q9Y651 276 aaPredicted RBP8.35□□□□□ -1.07
TPM3-217ENST00000504663 POMT1Q9Y6A1 747 aa8.35□□□□□ -1.07
TPM3-217ENST00000504663 TNCP24821 2201 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 LEUTXA8MZ59 168 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 TIMM23O14925 209 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 NPFFO15130 113 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 KCNAB3O43448 404 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 VENTXO95231 258 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 GAPDHP04406 335 aaKnown RBP8.34□□□□□ -1.07
TPM3-217ENST00000504663 SAA1P0DJI8 122 aaPredicted RBP8.34□□□□□ -1.07
TPM3-217ENST00000504663 CNTFRP26992 372 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 AKR1C2P52895 323 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 SSBP2P81877 361 aaPredicted RBP8.34□□□□□ -1.07
TPM3-217ENST00000504663 PDLIM3Q53GG5 364 aaPredicted RBP8.34□□□□□ -1.07
TPM3-217ENST00000504663 FOXRED2Q8IWF2 684 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 OR8H3Q8N146 312 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 RPEQ96AT9 228 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 SPIN2AQ99865 258 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 SPIN2BQ9BPZ2 258 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
TPM3-217ENST00000504663 GSKIPQ9P0R6 139 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms