RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 PJVKQ0ZLH3 352 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 MEF2DQ14814 521 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 ECSCRQ19T08 205 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 ZNF562Q6V9R5 426 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 IDO2Q6ZQW0 420 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 LHFPL1Q86WI0 220 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 SLC38A6Q8IZM9 456 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 VKORC1L1Q8N0U8 176 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 POC5Q8NA72 575 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 THAP7Q9BT49 309 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-210ENST00000498739 FAM103A1Q9BTL3 118 aaKnown RBP13.17□□□□□ -0.3
PRKCB-210ENST00000498739 ZNF580Q9UK33 172 aa13.17□□□□□ -0.3
PRKCB-210ENST00000498739 ANKRD20A5PA0PJZ0 165 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 DISC1C4P0D8 188 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 RBFOX2O43251 390 aaKnown RBP eCLIP13.16□□□□□ -0.34e-7■□□□□ 9.2
PRKCB-210ENST00000498739 CNIH1O95406 144 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 TSPAN15O95858 294 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 PTBP1P26599 531 aaKnown RBP eCLIP13.16□□□□□ -0.32e-7■■■■■ 37.9
PRKCB-210ENST00000498739 CFHR3Q02985 330 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 FXYD3Q14802 87 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 ZNF79Q15937 498 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 PRR31Q5SQ13 230 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 TEX38Q6PEX7 206 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 Q8N402 240 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 COMMD1Q8N668 190 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 OR4C16Q8NGL9 310 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 GRPEL2Q8TAA5 225 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
PRKCB-210ENST00000498739 TSSC4Q9Y5U2 329 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-210ENST00000498739 TET2Q6N021 2002 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-210ENST00000498739 ADARB2-AS1A8MUL3 147 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 ARPC1BO15143 372 aaKnown RBP13.15□□□□□ -0.3
PRKCB-210ENST00000498739 HPRT1P00492 218 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 HRASP01112 189 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 ZNF735P0CB33 412 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 ETV6P41212 452 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 TNXAQ16473 311 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 SSX9Q7RTT3 188 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 TERB2Q8NHR7 220 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 CD300LFQ8TDQ1 290 aa13.15□□□□□ -0.3
PRKCB-210ENST00000498739 A0A1W2PN81 502 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 A6NHS1 94 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 CREBL2O60519 120 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 S1PR2O95136 353 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 EGR2P11161 476 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 PI3P19957 117 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 F2RP25116 425 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 PPIFP30405 207 aaKnown RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 CHRNA7P36544 502 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 CRIP2P52943 208 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 SSBP2P81877 361 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 TMEM267Q0VDI3 215 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 PRSS8Q16651 343 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 UNQ5815/PRO19632Q6UWF5 114 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 LCNL1Q6ZST4 164 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 TBC1D26Q86UD7 250 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 VSTM2AQ8TAG5 236 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 FAM110DQ8TAY7 271 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-210ENST00000498739 TRIM63Q969Q1 353 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 RHOVQ96L33 236 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 SLC2A9Q9NRM0 540 aa13.14□□□□□ -0.31
PRKCB-210ENST00000498739 OR2A4O95047 310 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 IGHG4P01861 327 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
PRKCB-210ENST00000498739 ELANEP08246 267 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 TAS2R31P59538 309 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 FOXE3Q13461 319 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 MRGPRG-AS1Q2M3A8 158 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 TREML4Q6UXN2 200 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 PUSL1Q8N0Z8 303 aaKnown RBP13.13□□□□□ -0.31
PRKCB-210ENST00000498739 TOMM5Q8N4H5 51 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 LFNGQ8NES3 379 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 MARCH1Q8TCQ1 289 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 R3HDM4Q96D70 268 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 ZNF486Q96H40 463 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-210ENST00000498739 OR2A7Q96R45 310 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 AIFM2Q9BRQ8 373 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 SRRQ9GZT4 340 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-210ENST00000498739 MCUBQ9NWR8 336 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 NUBP2Q9Y5Y2 271 aa13.13□□□□□ -0.31
PRKCB-210ENST00000498739 ACTL6BO94805 426 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 KBTBD11O94819 623 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 NQO2P16083 231 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 LPAR6P43657 344 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 PIGPP57054 158 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 AP3S2P59780 193 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 RPL23AP62750 156 aaKnown RBP13.12□□□□□ -0.31
PRKCB-210ENST00000498739 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 OR4A47Q6IF82 309 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 TCTEX1D1Q8N7M0 179 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 MINDY2Q8NBR6 621 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
PRKCB-210ENST00000498739 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms