RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 DGCR2P98153 550 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 CDK10Q15131 360 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 OR5AP2Q8NGF4 316 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 OR4S2Q8NH73 311 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 GPHA2Q96T91 129 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 PHB2Q99623 299 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 ZNF430Q9H8G1 570 aaPredicted RBP14.22□□□□□ -0.13
HOXD11-202ENST00000498438 CCL28Q9NRJ3 127 aa14.22□□□□□ -0.13
HOXD11-202ENST00000498438 TNFSF12O43508 249 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 APELAP0DMC3 54 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 FXYD4P59646 89 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 MSMO1Q15800 293 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 ZNF66Q6ZN08 573 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 MFSD4AQ8N468 514 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 SRSF12Q8WXF0 261 aaKnown RBP14.21□□□□□ -0.13
HOXD11-202ENST00000498438 ACOT12Q8WYK0 555 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 DCUN1D4Q92564 292 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 RHOVQ96L33 236 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 TMEM68Q96MH6 324 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 COMMD3Q9UBI1 195 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 ZMAT5Q9UDW3 170 aaKnown RBP14.21□□□□□ -0.13
HOXD11-202ENST00000498438 SCOCQ9UIL1 159 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 ANAPC10Q9UM13 185 aa14.21□□□□□ -0.13
HOXD11-202ENST00000498438 MSGN1A6NI15 193 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 CREBL2O60519 120 aaPredicted RBP14.2□□□□□ -0.14
HOXD11-202ENST00000498438 BRWD1-AS2P59051 145 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 DEFB121Q5J5C9 76 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 VKORC1L1Q8N0U8 176 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 DLX4Q92988 240 aaPredicted RBP14.2□□□□□ -0.14
HOXD11-202ENST00000498438 SLC5A7Q9GZV3 580 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 NAA50Q9GZZ1 169 aaKnown RBP14.2□□□□□ -0.14
HOXD11-202ENST00000498438 COA4Q9NYJ1 87 aa14.2□□□□□ -0.14
HOXD11-202ENST00000498438 C13orf42A0A1B0GVH6 325 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 OVOL1O14753 267 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 RAMP3O60896 148 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 HSPB1P04792 205 aaKnown RBP14.19□□□□□ -0.14
HOXD11-202ENST00000498438 DEFA5Q01523 94 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 C10orf55Q5SWW7 151 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 TMEM17Q86X19 198 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 MMD2Q8IY49 270 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 GIMAP1Q8WWP7 306 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 TINAGL1Q9GZM7 467 aaPredicted RBP14.19□□□□□ -0.14
HOXD11-202ENST00000498438 EHFQ9NZC4 300 aa14.19□□□□□ -0.14
HOXD11-202ENST00000498438 MPPED1O15442 326 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 ACTL6BO94805 426 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 GABARAPO95166 117 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 PRSS3P35030 304 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 ECI1P42126 302 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 KIR2DS2P43631 304 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 HERV-K104P61576 105 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 CTF1Q16619 201 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 ANKRD13BQ86YJ7 626 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 ZBTB34Q8NCN2 500 aa14.18□□□□□ -0.14
HOXD11-202ENST00000498438 A0A0G2JLM5 398 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 KBTBD11O94819 623 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 BRI3O95415 125 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 APOA1P02647 267 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 NAT1P18440 290 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 RFX2P48378 723 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 RORCP51449 518 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 INSL3P51460 131 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 ZNF818PQ6ZRF7 136 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 PUSL1Q8N0Z8 303 aaKnown RBP14.17□□□□□ -0.14
HOXD11-202ENST00000498438 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
HOXD11-202ENST00000498438 VSTM2AQ8TAG5 236 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 CMTM3Q96MX0 182 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 PRR25Q96S07 402 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 MRPS26Q9BYN8 205 aaKnown RBP14.17□□□□□ -0.14
HOXD11-202ENST00000498438 SORL1Q92673 2214 aa14.17□□□□□ -0.14
HOXD11-202ENST00000498438 SULT1C2O00338 296 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 HPGDSO60760 199 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SAP30O75446 220 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 OR2A4O95047 310 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 PMP2P02689 132 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 OR9G9P0C7N8 305 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 ELK1P19419 428 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 TAS2R46P59540 309 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 CATR1Q13166 79 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 DYRK1AQ13627 763 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 GPR107Q5VW38 600 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SSX9Q7RTT3 188 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SPAG16Q8N0X2 631 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 OR5H2Q8NGV7 314 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 OR2A7Q96R45 310 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SPIN2AQ99865 258 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SPIN2BQ9BPZ2 258 aa14.16□□□□□ -0.14
HOXD11-202ENST00000498438 SMIM31A0A1B0GVY4 71 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 RBMXL2O75526 392 aaKnown RBP14.15□□□□□ -0.14
HOXD11-202ENST00000498438 HRASP01112 189 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 DHRS11Q6UWP2 260 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 ZNF429Q86V71 674 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 SNX29P2Q8IUI4 249 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 OR51H1Q8NH63 302 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 TMEM167AQ8TBQ9 72 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 GPX8Q8TED1 209 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 ZNF2Q9BSG1 426 aaPredicted RBP14.15□□□□□ -0.14
HOXD11-202ENST00000498438 DNAH9Q9NYC9 4486 aa14.15□□□□□ -0.14
HOXD11-202ENST00000498438 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
HOXD11-202ENST00000498438 RBFOX2O43251 390 aaKnown RBP eCLIP14.14□□□□□ -0.15
HOXD11-202ENST00000498438 PRH1P02810 166 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms