RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 PYY3Q5JQD4 70 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 FAM74A1Q5RGS3 127 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 OR10K2Q6IF99 312 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 SFXN4Q6P4A7 337 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 NAA40Q86UY6 237 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 PDZD9Q8IXQ8 264 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 OR8I2Q8N0Y5 310 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 GATD1Q8NB37 220 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 OR4K17Q8NGC6 315 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 OR9I1Q8NGQ6 314 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 BLNKQ8WV28 456 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 ARL11Q969Q4 196 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 CLDN23Q96B33 292 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 FMC1Q96HJ9 113 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 CCDC115Q96NT0 180 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 APOL4Q9BPW4 351 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 FAAP24Q9BTP7 215 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 SMIM3Q9BZL3 60 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 Q9H521 79 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 EFCAB1Q9HAE3 211 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 SND1-IT1Q9HBX3 110 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 UBQLN4Q9NRR5 601 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 DOK5Q9P104 306 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 ERG28Q9UKR5 140 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 LSM5Q9Y4Y9 91 aaKnown RBP2.26□□□□□ -2.05
CALD1-224ENST00000498254 SNX10Q9Y5X0 201 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 ZNF780BQ9Y6R6 833 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 MYH11P35749 1972 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 AKAP11Q9UKA4 1901 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 TOP2AP11388 1531 aaKnown RBP2.26□□□□□ -2.05
CALD1-224ENST00000498254 GRIN2BQ13224 1484 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 MBD5Q9P267 1494 aa2.26□□□□□ -2.05
CALD1-224ENST00000498254 TNS3Q68CZ2 1445 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SETD1AO15047 1707 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 BCORL1Q5H9F3 1711 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SCN1AP35498 2009 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 ADAMTSL3P82987 1691 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 ARID1AO14497 2285 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 MYH3P11055 1940 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 ADAMTS12P58397 1594 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TRAV30A0A087WSZ9 112 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 LOC100130705A0A1B0GUX0 176 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TMEM72A0PK05 275 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TMEM218A2RU14 115 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 C7orf66A4D0T2 115 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TMEM189A5PLL7 270 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 J3QRK9 145 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SYNGR1O43759 233 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 STK16O75716 305 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 OR2A4O95047 310 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 MPC2O95563 127 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SEC11BP0C7V7 166 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SULT1A3P0DMM9 295 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SULT1A4P0DMN0 295 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CD79AP11912 226 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 RPL7P18124 248 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 PRTN3P24158 256 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CD34P28906 385 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 S100A2P29034 98 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 GABRA2P47869 451 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 GZMMP51124 257 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TAS2R30P59541 319 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 DEFA1P59665 94 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 RPL26P61254 145 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 HIST1H1AQ02539 215 aaPredicted RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 ZNF846Q147U1 533 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CEACAM16Q2WEN9 425 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CLLU1Q5K131 121 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 COL5A1-AS1Q5SY13 56 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 AKR1C8PQ5T2L2 129 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TOMM20LQ6UXN7 152 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 ALKAL1Q6UXT8 129 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 FAM183BPQ6ZVS7 135 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 FAM231DQ6ZW35 169 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CALHM3Q86XJ0 350 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 FAM24BQ8N5W8 94 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 LINC00337Q8N6G1 96 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SLC25A29Q8N8R3 303 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 FNDC9Q8TBE3 224 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 GPR119Q8TDV5 335 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SLC37A2Q8TED4 501 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 DEDD2Q8WXF8 326 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 PPCDCQ96CD2 204 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 IP6K3Q96PC2 410 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 OR2A7Q96R45 310 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 TRIB3Q96RU7 358 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CHCHD7Q9BUK0 85 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 NKX6-2Q9C056 277 aaPredicted RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 C20orf27Q9GZN8 174 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 PLEKHF2Q9H8W4 249 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 POPDC3Q9HBV1 291 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 SPANXA1Q9NS26 97 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CISHQ9NSE2 258 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 RPL26L1Q9UNX3 145 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 LAMTOR2Q9Y2Q5 125 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 CARHSP1Q9Y2V2 147 aaKnown RBP2.25□□□□□ -2.05
CALD1-224ENST00000498254 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.25□□□□□ -2.05
CALD1-224ENST00000498254 HDGFL3Q9Y3E1 203 aa2.25□□□□□ -2.05
CALD1-224ENST00000498254 INSIG2Q9Y5U4 225 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms