RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 MMD2Q8IY49 270 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 OR5H6Q8NGV6 325 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 SRSF12Q8WXF0 261 aaKnown RBP9.78□□□□□ -0.84
PTPRF-214ENST00000496043 ACOT12Q8WYK0 555 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 HSD17B10Q99714 261 aaKnown RBP9.78□□□□□ -0.84
PTPRF-214ENST00000496043 SPIN2AQ99865 258 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 SPIN2BQ9BPZ2 258 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 ZNF430Q9H8G1 570 aaPredicted RBP9.78□□□□□ -0.84
PTPRF-214ENST00000496043 DIABLOQ9NR28 239 aa9.78□□□□□ -0.84
PTPRF-214ENST00000496043 IGKV1D-13A0A0B4J2D9 117 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 TMEM127O75204 238 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 SAA1P0DJI8 122 aaPredicted RBP9.77□□□□□ -0.85
PTPRF-214ENST00000496043 APELAP0DMC3 54 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 IGKV1-13P0DP09 117 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 ARPC4P59998 168 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 RPL30P62888 115 aaKnown RBP9.77□□□□□ -0.85
PTPRF-214ENST00000496043 ZNF66Q6ZN08 573 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 HOGA1Q86XE5 327 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 MFSD4AQ8N468 514 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 ADAD2Q8NCV1 583 aaKnown RBP9.77□□□□□ -0.85
PTPRF-214ENST00000496043 BEST4Q8NFU0 473 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 TCTEX1D2Q8WW35 142 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 RSRP1Q9BUV0 290 aa9.77□□□□□ -0.85
PTPRF-214ENST00000496043 IGLV1-51P01701 117 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 IGLV2-14P01704 120 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 FCGR2CP31995 323 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 ATP5G2Q06055 141 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 DYRK1AQ13627 763 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 KCTD21Q4G0X4 260 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 OR2B11Q5JQS5 317 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 OVCH2Q7RTZ1 564 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 SLC25A42Q86VD7 318 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 CROCCP3Q8IVE0 287 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 TTC9CQ8N5M4 171 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 OR4S2Q8NH73 311 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 VSTM2AQ8TAG5 236 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 SNAPC3Q92966 411 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 SPATA2Q9UM82 520 aa9.76□□□□□ -0.85
PTPRF-214ENST00000496043 FAM223BA6NKX1 122 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 H0Y980 276 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 OR2A4O95047 310 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 HRASP01112 189 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 CBX5P45973 191 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 SYNJ2BPP57105 145 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 RHOGP84095 191 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 RPEL1Q2QD12 228 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 TIMM50Q3ZCQ8 353 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 FAM223AQ8IWN6 122 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 VKORC1L1Q8N0U8 176 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 GVQW1Q8N7I0 195 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 ZBTB34Q8NCN2 500 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 SLC25A38Q96DW6 304 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 S100A16Q96FQ6 103 aaKnown RBP9.75□□□□□ -0.85
PTPRF-214ENST00000496043 OR2A7Q96R45 310 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 AIFM2Q9BRQ8 373 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 AUNIPQ9H7T9 357 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 AKIP1Q9NQ31 210 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 CCL28Q9NRJ3 127 aa9.75□□□□□ -0.85
PTPRF-214ENST00000496043 TRBV9A0A0B4J1U6 114 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 TRIM64CA6NLI5 447 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 MAS1LP35410 378 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 KIR2DS2P43631 304 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 DEFA5Q01523 94 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 EIF4EBP1Q13541 118 aaPredicted RBP9.74□□□□□ -0.85
PTPRF-214ENST00000496043 MSMO1Q15800 293 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 IL34Q6ZMJ4 242 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 PUSL1Q8N0Z8 303 aaKnown RBP9.74□□□□□ -0.85
PTPRF-214ENST00000496043 TMEM167AQ8TBQ9 72 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 SECTM1Q8WVN6 248 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 TAS2R8Q9NYW2 309 aa9.74□□□□□ -0.85
PTPRF-214ENST00000496043 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 A0A087WXM4 84 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 DPPA5A6NC42 116 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 XRCC3O43542 346 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 AIREO43918 545 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
PTPRF-214ENST00000496043 KBTBD11O94819 623 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 TRBV12-3P01733 135 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 PRH1P02810 166 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 CSN3P07498 182 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 FRMD6-AS1P0C7T7 363 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 PTHLHP12272 177 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 RPL27AP46776 148 aaKnown RBP9.73□□□□□ -0.85
PTPRF-214ENST00000496043 BRWD1-AS2P59051 145 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 ZNF45Q02386 682 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 FAM209BQ5JX69 171 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 HAPLN4Q86UW8 402 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 Q8N1Y9 231 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 NECAP1Q8NC96 275 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 OR5AP2Q8NGF4 316 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 GIMAP1Q8WWP7 306 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 SLC5A7Q9GZV3 580 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 ZMAT4Q9H898 229 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 VCX3AQ9NNX9 186 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 SIGLEC8Q9NYZ4 499 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 PEMTQ9UBM1 199 aa9.73□□□□□ -0.85
PTPRF-214ENST00000496043 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
PTPRF-214ENST00000496043 TNFSF12O43508 249 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms