RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 C3orf56Q8N813 242 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 TEX45Q8NA69 505 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 PLEKHA2Q9HB19 425 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 SIGLEC9Q9Y336 463 aa13.56□□□□□ -0.24
HDAC6-235ENST00000495515 LINC00854A0A1B0GVQ3 168 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 HAX1O00165 279 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 AP4M1O00189 453 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 RAMP3O60896 148 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 B3GALNT1O75752 331 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 IGLV2-23P01705 113 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 PI3P19957 117 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 PROK1P58294 105 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 TAS2R31P59538 309 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 PPP1R27Q86WC6 154 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 MRGPRFQ96AM1 343 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 SERTAD4Q9NUC0 356 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 COMMD9Q9P000 198 aa13.55□□□□□ -0.24
HDAC6-235ENST00000495515 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
HDAC6-235ENST00000495515 NQO2P16083 231 aa13.54□□□□□ -0.24
HDAC6-235ENST00000495515 BRWD1-AS2P59051 145 aa13.54□□□□□ -0.24
HDAC6-235ENST00000495515 ERVK-16P61578 105 aa13.54□□□□□ -0.24
HDAC6-235ENST00000495515 RHOVQ96L33 236 aa13.54□□□□□ -0.24
HDAC6-235ENST00000495515 GON7Q9BXV9 100 aa13.54□□□□□ -0.24
HDAC6-235ENST00000495515 TEX13DA0A0J9YY54 714 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-235ENST00000495515 H0Y980 276 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 OR2A4O95047 310 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 SERPINE2P07093 398 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 SAA1P0DJI8 122 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-235ENST00000495515 VSIG10L2P0DP72 767 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 LPAR6P43657 344 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
HDAC6-235ENST00000495515 ZNF562Q6V9R5 426 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 CENPVQ7Z7K6 275 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-235ENST00000495515 KLHDC1Q8N7A1 406 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 CHPT1Q8WUD6 406 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 OR2A7Q96R45 310 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 RTBDNQ9BSG5 229 aaPredicted RBP13.53□□□□□ -0.24
HDAC6-235ENST00000495515 OR51J1Q9H342 316 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 C5orf66Q9H5L9 145 aa13.53□□□□□ -0.24
HDAC6-235ENST00000495515 IGHV7-81A0A0B4J1V7 117 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 C3orf85A0A1B0GTC6 90 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 ACTL6BO94805 426 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 ATG12O94817 140 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 S1PR2O95136 353 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 CRYGBP07316 175 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 RPA2P15927 270 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 SLC35B1P78383 322 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 CX3CL1P78423 397 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 TMEM95Q3KNT9 176 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 SGPP2Q8IWX5 399 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 MMD2Q8IY49 270 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 DMBX1Q8NFW5 382 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 OR4A5Q8NH83 315 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 ABHD5Q8WTS1 349 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 WFDC12Q8WWY7 111 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 HSPB9Q9BQS6 159 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 ZNF747Q9BV97 191 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 WNT10AQ9GZT5 417 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 ZNF580Q9UK33 172 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 KCNIP3Q9Y2W7 256 aa13.52□□□□□ -0.25
HDAC6-235ENST00000495515 LYRM1O43325 122 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 CNIH1O95406 144 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 CA2P00918 260 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 IGF1P05019 195 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 POU2AF1Q16633 256 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 PRSS8Q16651 343 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 ZNF585BQ52M93 769 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 SSX9Q7RTT3 188 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 VKORC1L1Q8N0U8 176 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 STPG2Q8N412 459 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 R3HDM4Q96D70 268 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 NAA60Q9H7X0 242 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 PARP11Q9NR21 331 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 VSIG4Q9Y279 399 aa13.51□□□□□ -0.25
HDAC6-235ENST00000495515 PSMB11A5LHX3 300 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 CRYM-AS1A6NIL9 109 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 FCN1O00602 326 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 UPK1BO75841 260 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 KBTBD11O94819 623 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 VDAC1P21796 283 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 GNB1P62873 340 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 DHODHQ02127 395 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 TMEM267Q0VDI3 215 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-235ENST00000495515 FXYD3Q14802 87 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 MZT2BQ6NZ67 158 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 SHISA2Q6UWI4 295 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 TMED4Q7Z7H5 227 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 PUSL1Q8N0Z8 303 aaKnown RBP13.5□□□□□ -0.25
HDAC6-235ENST00000495515 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 TPSG1Q9NRR2 321 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 BET1LQ9NYM9 111 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
HDAC6-235ENST00000495515 PIGBOS1A0A0B4J2F0 54 aa13.49□□□□□ -0.25
HDAC6-235ENST00000495515 LINC01548A6NM66 108 aa13.49□□□□□ -0.25
HDAC6-235ENST00000495515 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
HDAC6-235ENST00000495515 ATP6V0E1O15342 81 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms