RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZNF486Q96H40 463 aaPredicted RBP9.54□□□□□ -0.88
CSNK1E-213ENST00000495232 IGHV7-81A0A0B4J1V7 117 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 SRRM4A7MD48 611 aaKnown RBP9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 M0QZ24 198 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 FCN1O00602 326 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 ATP6V0E1O15342 81 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 RAMP3O60896 148 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 ACTL6BO94805 426 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 HPRT1P00492 218 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 CA2P00918 260 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 IGLV2-23P01705 113 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 OPN1MWP04001 364 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 IGF1P05019 195 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 OPN1MW2P0DN77 364 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 OPN1MW3P0DN78 364 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 CD28P10747 220 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 F2RP25116 425 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 CX3CL1P78423 397 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 ZNF45Q02386 682 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 KHDC1LQ5JSQ8 128 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 ZNF57Q68EA5 555 aaPredicted RBP9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 TEX38Q6PEX7 206 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 IDO2Q6ZQW0 420 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 COMMD1Q8N668 190 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 TCTEX1D1Q8N7M0 179 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 GDPD1Q8N9F7 314 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 SCGB3A2Q96PL1 93 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 COPZ2Q9P299 210 aa9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 C14orf166Q9Y224 244 aaKnown RBP9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 TET2Q6N021 2002 aaPredicted RBP9.53□□□□□ -0.88
CSNK1E-213ENST00000495232 TRAV41A0A0B4J266 112 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 TCRBV4S1A1TA0A5B7 111 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 OR2A4O95047 310 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 ZNF735P0CB33 412 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 SAA1P0DJI8 122 aaPredicted RBP9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 NQO2P16083 231 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 PIGPP57054 158 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 TAS2R31P59538 309 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 ERVK-16P61578 105 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 FXYD3Q14802 87 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 ECSCRQ19T08 205 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 C2orf68Q2NKX9 166 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 NSUN5P1Q3KNT7 163 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 SSX9Q7RTT3 188 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 TBC1D26Q86UD7 250 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 MMD2Q8IY49 270 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 CCDC71LQ8N9Z2 235 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 DMBX1Q8NFW5 382 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 OR51S1Q8NGJ8 323 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 GRPEL2Q8TAA5 225 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 DEDD2Q8WXF8 326 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 ARPC1AQ92747 370 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 RHOVQ96L33 236 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 OR2A7Q96R45 310 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 SRRQ9GZT4 340 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 PLEKHA2Q9HB19 425 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 SLC2A9Q9NRM0 540 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 TPSG1Q9NRR2 321 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 WSB1Q9Y6I7 421 aa9.52□□□□□ -0.89
CSNK1E-213ENST00000495232 CRYGBP07316 175 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 PI3P19957 117 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 CD40LGP29965 261 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 BRWD1-AS2P59051 145 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 PJVKQ0ZLH3 352 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 KLF9Q13886 244 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 TNXAQ16473 311 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 CXorf66Q5JRM2 361 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 TMEM65Q6PI78 240 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 C10orf99Q6UWK7 81 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 LINC00299Q6ZSB3 139 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 NDUFA11Q86Y39 141 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 OR13C8Q8NGS7 320 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 WIPF2Q8TF74 440 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 TRIM63Q969Q1 353 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 PHB2Q99623 299 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 CITED2Q99967 270 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 HRASLSQ9HDD0 168 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 SLC2A8Q9NY64 477 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 COMMD9Q9P000 198 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 ZNF580Q9UK33 172 aa9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 TSSC4Q9Y5U2 329 aaPredicted RBP9.51□□□□□ -0.89
CSNK1E-213ENST00000495232 MPPED1O15442 326 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 KBTBD11O94819 623 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 S1PR2O95136 353 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 SERPINE2P07093 398 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 CTSDP07339 412 aaPredicted RBP9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 LPAR6P43657 344 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 RND3P61587 244 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 CD83Q01151 205 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 SURF2Q15527 256 aaPredicted RBP9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 PRSS8Q16651 343 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 UNQ5815/PRO19632Q6UWF5 114 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 OR4A5Q8NH83 315 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 S100ZQ8WXG8 99 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 R3HDM4Q96D70 268 aa9.5□□□□□ -0.89
CSNK1E-213ENST00000495232 FAM103A1Q9BTL3 118 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms